Gene Bamb_2159 details

Gene Information

• Locus tag: Bamb_2159
• Symbol: hscA
• ID: 4311024
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 2371459
• End bp: 2373327
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638149984
• Product: chaperone protein HscA
• Protein accession: YP_774049
• Protein GI: 115352210
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.265898
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAC TGCAAATTTC CGAACCGGGC ATGGCGCCGG CGCCGCACCA GCGGCGACTC 
GCTGTCGGGA TCGATCTCGG CACGACGAAC TCGCTCGTCG CGGCCGTGCG CAACAGCGTG 
CCCGAAGTGC TGCCGGACGA GGCGGGCCGC GCGCTGCTGC CGTCGGTGGT CCGTTATCTG 
GAGAAGGGCG GCCGCCGCAT CGGCCACGAA GCGAAGGAGC AGGCCGCGAC CGATCCGCGC 
AACACGATCG TGTCGGTCAA GCGCTTCATG GGTCGCGGCA AGGCCGAGGT CGAAGGCGCG 
GCGAACGCAC CTTACGAATT CATCGATGCG CCGGGCATGG TGCAGATCCG CACGATCGAC 
GGCGTGAAGA GCCCGGTCGA AGTGTCGGCC GAGATTCTCG CGACGCTGCG TTACCGCGCG 
GAAGACACGC TTGGCGACGA GCTGGTCGGC GCGGTGATCA CGGTGCCCGC GTATTTCGAC 
GAGGCGCAAC GTCAGGCGAC GAAGGACGCC GCGCGTCTCG CGGGCCTCAA CGTGCTGCGC 
CTGCTGAACG AACCGACCGC GGCCGCGATC GCCTATGGGC TCGACAACGC GGCCGAAGGC 
CTCTACGCGG TGTACGACCT CGGCGGCGGC ACGTTCGACC TGTCGATCCT GAAGCTGACG 
AAGGGCGTGT TCGAAGTGCT GGCCGCGGGC GGCGATTCCG CACTCGGCGG CGACGATTTC 
GATCACCTGC TGTTCGGTCA CGTGCTCGCA CAGGCCGGCA TCGACGCGAA GGCGCTCGCG 
CCCGAGGACG TGCGCCTGCT GCTCGATCGC GTGCGCGTGC TGAAGGAAGC GCTGTCGTCG 
GCGCCGCAGG CGTCGCTCGA TGTGACGCTG TCGAACGGCA CGCGGCTCGT GCAGACGATC 
TCGCACGACA CGTTCGCGTC GCTCGTCGAG CCGCTCGTGC AGCGTACGCT GACGCCCACC 
CGCAAGGCAT TGCGCGACGC GCAGGTGACG CCGGCCGACA TCAAGGGTGT CGTGCTGGTC 
GGCGGCGCGA CGCGCATGCC GGTGATCCGC GATGCGGTCG CGAAGTATTT CGGCCAGCCG 
CCGCTCGTCA ATCTCGATCC GGACCAGGTC GTCGCGCTCG GCGCTGCGAT CCAGGCCGAC 
CTGCTCGCCG GCAATCGCGG CGGCGGCGAC GACTGGCTGC TGCTCGACGT GATTCCGCTG 
TCGCTCGGGG TCGAGACGAT GGGTGGTCTC GTCGAGAAGA TCATTCCGCG CAATTCGACG 
ATTCCGATCG CGCGTGCGCA GGAGTTCACG ACCTTCAAGG ACGGTCAGAC CGCGATGGCG 
ATCCACGTCG TGCAGGGCGA GCGCGAGCTC GTCGCCGACT GCCGGTCGCT CGCACGCTTC 
GAGCTGCGCG GCATCCCGCC GATGACGGCC GGTGCGGCGC GCATCCGCGT GACCTATCAG 
GTCGATGCGG ATGGGTTGCT GTCGGTGTTC GCACGTGAGC AGCATTCGGG CGTCGAGGCA 
TCGGTCGTCG TGAAGCCGTC GTACGGCCTC GCCGACGACG ACATCGCGAA GATGCTCGAG 
GACAGCTTCA AGACCGCCGA GATCGACATG CGCGCACGCG CGCTGCGCGA AGCTCAGGTC 
GAAGCCCAGC GGATGATCGA GGCGACGCAG GCGGCACTTG CAGCCGACGG CGAATTGCTC 
GACGACGCCG AACGCACGCA GGTCGACGCG CTCGTCGCGG CGCTGCGCAC GATCGCTCAG 
GGCGACGACG CGGACGCGAT CGAAACCGCG ACCAAGGCAT TGGCCGACGG CACCGACGAA 
TTCGCGGCGC GCCGGATGGA CAAGAGCATC AAGCGCGCAC TGTCGGGCCG ACGGCTCGAC 
GAGATCTGA 

 

Protein sequence

MALLQISEPG MAPAPHQRRL AVGIDLGTTN SLVAAVRNSV PEVLPDEAGR ALLPSVVRYL 
EKGGRRIGHE AKEQAATDPR NTIVSVKRFM GRGKAEVEGA ANAPYEFIDA PGMVQIRTID 
GVKSPVEVSA EILATLRYRA EDTLGDELVG AVITVPAYFD EAQRQATKDA ARLAGLNVLR 
LLNEPTAAAI AYGLDNAAEG LYAVYDLGGG TFDLSILKLT KGVFEVLAAG GDSALGGDDF 
DHLLFGHVLA QAGIDAKALA PEDVRLLLDR VRVLKEALSS APQASLDVTL SNGTRLVQTI 
SHDTFASLVE PLVQRTLTPT RKALRDAQVT PADIKGVVLV GGATRMPVIR DAVAKYFGQP 
PLVNLDPDQV VALGAAIQAD LLAGNRGGGD DWLLLDVIPL SLGVETMGGL VEKIIPRNST 
IPIARAQEFT TFKDGQTAMA IHVVQGEREL VADCRSLARF ELRGIPPMTA GAARIRVTYQ 
VDADGLLSVF AREQHSGVEA SVVVKPSYGL ADDDIAKMLE DSFKTAEIDM RARALREAQV 
EAQRMIEATQ AALAADGELL DDAERTQVDA LVAALRTIAQ GDDADAIETA TKALADGTDE 
FAARRMDKSI KRALSGRRLD EI