Gene Bamb_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2154 
Symbol 
ID4311019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2366689 
End bp2367909 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content64% 
IMG OID638149979 
Productpeptide chain release factor 2 
Protein accessionYP_774044 
Protein GI115352205 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0694962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCCG CGCCGAACGG GCCACGGCGC GCATGCAAGC ACACTCCGCG TCACCGGGAA 
ACCCCGCCGA TCGGCTATAA TTCCGCTTTT TTACGAAGCA AGAACAGCGA ACGATCATGG
AAGCGGAACG TCTCAACGCG ATCGAAAGCT CCCTGCTCGA CCTGCGCACC CGCGCGGGCG
AGCTTCGGGG GTATCTTTGA CTACGACGCC AAATCTGCGC GTCTGACCGA AGTCAACAAG
GAACTCGAAG ACCCGAACGT CTGGAACGAT TCGAAGAACG CCCAGGCACT CGGCCGCGAG
AAGAAGCTGC TCGAAGGTGT CGTCACGACG CTCACCGCGC TCGATAGCGA CCTGCGCGAT
GCGCTCGACC TGTTCGAGCT CGCACGCGAG GAAGGCGACG AAGACACCCT CGTCGCATCC
GAAGACGACG CGAAGAAGCT CGAAGCGCGC GTCGGCGACA TCGAATTCCG CCGGATGTTC
TCGAACCCGG CCGACCCGAA CAACTGCTTC ATCGACATCC AGGCCGGCGC CGGCGGCACC
GAGGCGTGCG ACTGGGCGTC GATGCTGCTG CGCCAATACC TGCGCTACTG CGAGCGCAAG
GGCTTCAAGG CCGAAGTGCT CGAAGAGTCG GACGGCGACG TCGCCGGCAT CAAGAACGCG
ACGGTCAAGG TCACGGGCGA ATACGCATAC GGCTTCCTGC GCACCGAAAC GGGCATCCAC
CGCCTCGTGC GCAAGTCGCC GTTCGACTCG TCCGGCGGCC GCCACACGTC GTTCTCGTCG
GTGTTCGTGT ATCCGGAAAT CGACGACTCG ATCGAAGTCG AGGTCAATCC GGCCGACCTG
CGCATCGACA CGTACCGCGC GTCGGGCGCG GGCGGCCAGC ACATCAACAA GACCGACTCG
GCCGTGCGGA TCACGCACAT GCCGACCGGC ATCGTCGTGC AGTGCCAGAA CGACCGCTCG
CAGCACCGCA ACCGTGCCGA AGCGATGGCG ATGCTGAAGT CGCGCCTGTA CGAAGCCGAG
ATGCGTAAGC GCCAGGCCGA GCAGGACAAG CTCGAATCGA GCAAGACCGA TGTGGGCTGG
GGCCACCAGA TCCGTTCGTA CGTGCTCGAC CAGAGCCGCG TGAAGGACCT GCGCACGAAC
GTCGAAATGA GCAACACGCG AGCCGTGCTC GACGGCGATC TCGACGACTT CATCAGCGCG
AGCCTCAAAC AGGGCGTGTA A
 
Protein sequence
MRAAPNGPRR ACKHTPRHRE TPPIGYNSAF LRSKNSERSW KRNVSTRSKA PCSTCAPARA 
SFGGIFDYDA KSARLTEVNK ELEDPNVWND SKNAQALGRE KKLLEGVVTT LTALDSDLRD
ALDLFELARE EGDEDTLVAS EDDAKKLEAR VGDIEFRRMF SNPADPNNCF IDIQAGAGGT
EACDWASMLL RQYLRYCERK GFKAEVLEES DGDVAGIKNA TVKVTGEYAY GFLRTETGIH
RLVRKSPFDS SGGRHTSFSS VFVYPEIDDS IEVEVNPADL RIDTYRASGA GGQHINKTDS
AVRITHMPTG IVVQCQNDRS QHRNRAEAMA MLKSRLYEAE MRKRQAEQDK LESSKTDVGW
GHQIRSYVLD QSRVKDLRTN VEMSNTRAVL DGDLDDFISA SLKQGV