Gene Bamb_2135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2135 
Symbol 
ID4310268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp2346337 
End bp2346999 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID638149960 
Productpeptidase M50 
Protein accessionYP_774025 
Protein GI115352186 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTT CCCTGATACA GACCATCGCC GTCTACGCGC TGCCCGTGAT CTTCGCGATC 
ACGCTGCACG AGGCCGCGCA TGGCTATGCC GCGCGCCTGC TCGGCGACAA CACCGCCTAC 
ATGATGGGGC GCGTGTCCTT CAATCCGATG CGCCACATCG ATCCGCTCGG CACGATCGCG 
ATCCCGCTCG CGATGTATTT CCTGACCGGC GGTGCGTTCC TGTTCGGCTA TGCGAAGCCG 
GTGCCGGTCT CGTTCGGCAA CCTGCGCAAT CCGCGCTGGG GCAGCCTGTG GGTCGCGCTC 
GCGGGCCCGG CCTGCAACTT CGTACAGGCG TTGATCTGGG GCGTGCTGAC CATCGTGCTG 
CCCGCAGCCG GCGTCGACGA ACCGTTCTTC ACGCGGATGG CCTACGCGGG CGTCAGCGCG 
AACCTGGTGC TCGGCGTGCT GAACCTGTTT CCGCTGCCGC CGCTCGACGG CGGCCGCATC 
CTGGCGGCGC TGCTGCCGCC GAAGCAATCG ATCGCGCTGT CGCGCATCGA GCCGTACGGT 
TTCATCATCG TCCTCGCGCT GGTCGCGACG GGCGTGCTGA CGAATTTCTG GCTGCGTCCG 
CTCGTGAACG CCGCGGCCGG CGTGCTGAGC GCCATCCTGT CTCCCTTCGC CTCGCTTTTC 
TAA
 
Protein sequence
MDASLIQTIA VYALPVIFAI TLHEAAHGYA ARLLGDNTAY MMGRVSFNPM RHIDPLGTIA 
IPLAMYFLTG GAFLFGYAKP VPVSFGNLRN PRWGSLWVAL AGPACNFVQA LIWGVLTIVL 
PAAGVDEPFF TRMAYAGVSA NLVLGVLNLF PLPPLDGGRI LAALLPPKQS IALSRIEPYG 
FIIVLALVAT GVLTNFWLRP LVNAAAGVLS AILSPFASLF