Gene Bamb_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2134 
Symbol 
ID4310267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2345126 
End bp2346328 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID638149959 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_774024 
Protein GI115352185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCCAG ATCGTATTTT CTCCGGCATG CGACCCACCG GGTCGCTGCA CCTCGGCCAC 
TACCACGGCG TGCTGAAAAA CTGGGTGAAG CTGCAGTCCG AGTACCCGTG TTTCTTCTGC
GTGGTCGACT GGCATGCGCT GACGACGCAC TACGAGACGC CCGAGGTCAT CGAGAAGAAC
GTGTGGGACG TGCTGATCGA CTGGCTCGCG TCCGGCATCG ATCCGGCGCA GGCGACGCTG
TTCATCCAGA GCAAGGTGCC CGAGCACGCG GAACTCGCGC TGCTGCTCGG CATGAGCACG
CCGCTCGGCT GGCTCGAGCG CGTGCCGACC TACAAGGAGC AGATGGAGAA GCTGAAGGAC
AAGGATCTGT CGACCTACGG CTTCCTCGGC TACCCGGTGC TGATGGCGGC CGACATCCTG
CTGTATCGCG GCTCGCTCGT GCCGGTCGGC GAAGACCAGG TGCCGCACGT CGAGATGACG
CGCGAGATCG CGCGCCGCTT CAACTACCTG TACGGCCGCG AGCCGGGCTT CGAGGAGAAG
GCGCTCGAAG CCGCGAAGAA GCTCGGCGGC AAGCGCGCGA AGCTCTATCA CGAGCTGCGC
AATGCATACC AGCAGGAGGG CGATGACGAG GCGCTCGAAC AGGCGCGCGC GATGCTGCAG
GAGTCGCAGA GCCTGTCGAT GAGCGACCGC GAGCGCCTGT TCGGCTATCT CGAAGGCGCG
CGCAAGATCA TCCTGGTCGA GCCGCAGGCG CTGCTGACCG AAGCGTCGCG GATGCCGGGC
CTCGACGGCC AGAAGATGTC GAAGTCGTAC GGCAATACGA TCGGCCTGCG CGAAGACGCG
GAGACGATCA CGAAGAAGGT CCGCACGATG CCGACCGATC CGGCGCGCGT GCGCCGCACC
GATCCGGGCG ATCCCGACAA GTGCCCGGTG TGGCAGCTGC ACCAGGTCTA TACGGACGCA
ACGACGCACG AGTGGGTGCA GCACGGCTGC CGTTCGGCGG GCATCGGTTG CCTCGACTGC
AAGCAGCCGG TCGTCGAAGG GATCCTGCGC GAACAGCAGC CGATGCTCGA GCGCGCGCAG
AAGTACATGG ATGATCCGTC GCTGCTGCGC GCGATCGTCG CGGACGGTTG CGACAAGGCG
CGCAAGCACG CGGTCGAGAC GATGCGCGAC GTGCGCGAGG CGATGGGCCT GTCGTACACC
TGA
 
Protein sequence
MFPDRIFSGM RPTGSLHLGH YHGVLKNWVK LQSEYPCFFC VVDWHALTTH YETPEVIEKN 
VWDVLIDWLA SGIDPAQATL FIQSKVPEHA ELALLLGMST PLGWLERVPT YKEQMEKLKD
KDLSTYGFLG YPVLMAADIL LYRGSLVPVG EDQVPHVEMT REIARRFNYL YGREPGFEEK
ALEAAKKLGG KRAKLYHELR NAYQQEGDDE ALEQARAMLQ ESQSLSMSDR ERLFGYLEGA
RKIILVEPQA LLTEASRMPG LDGQKMSKSY GNTIGLREDA ETITKKVRTM PTDPARVRRT
DPGDPDKCPV WQLHQVYTDA TTHEWVQHGC RSAGIGCLDC KQPVVEGILR EQQPMLERAQ
KYMDDPSLLR AIVADGCDKA RKHAVETMRD VREAMGLSYT