| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2132 |
|---|
| Symbol | |
|---|
| ID | 4310265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2343562 |
|---|
| End bp | 2344467 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149957 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_774022 |
|---|
| Protein GI | 115352183 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.769991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAACG GCACCCAAGA CGGCATTCAA ATCCGCGGCA GCATCCCCGC GATCGTCACT
CCGATGCTCG AAGACGGCAG TCTCGATCTG CCGGCGTTTC GCAAACTGAT CGACTGGCAC
ATCGCGGAAG GCACCGACGC CATCGTCGTG GTCGGCACGA GTGGCGAGTC GGCAACGCTC
AACGTCGAAG AGCACATCCT GATGATCCGC ACGGCGGTCG AGCATGCGGC GATGCGCATC
CCGATCATCG CGGGCGCGGG CGGCAATTCG ACCGCGGAGG CGATCGAACT GACGAAGCAC
GCGAAGGCCG TCGGCGCCGA CGCGACGCTG CAGGTCGTGC CGTACTACAA CAAGCCCACG
CAGGAAGGGA TGTACCGGCA CTTCAAGTCG ATCGCGGAAG CGGTCGACCT GCCGGTGATC
CTCTACAACG TGCCGGGCCG CACGGTCGCG GACATGGCGC ACGAGACGAC GCTGCGCCTC
GCACAGGTGC CGGGCATCAT CGGCGTGAAG GAAGCGACGG GCAACATCGA CCGCGCCGCG
CATCTGATCA AGGCCGCGCC CAAGCATTTC GCGATCTACA GCGGCGACGA TCCGACCGCG
ATCGCGCTGA TGCTGCTCGG CGGCCACGGC AACATCTCGG TGACGGCGAA CGTCGCACCG
CGCGCGATGA GCGACCTGTG TCGCGCGGCG CTGGCCGGCG ACGTCGCCAC GGCGCGGGCG
CTGCACATGA AGCTGCTGTC GTTGCACAAG AACCTGTTCA TCGAGGCGAA CCCGATTCCG
GTGAAGTGGG CGCTGCAGGC GATGGGCAAG ATGCAGGGCG GCATCCGCCT GCCGCTTACG
CCGCTCGACG AGCGCTGTCA CGATGTCGTG CGTTCGGCTC TCGTCGAGGC CGGCGTCCTC
GCCTGA
|
|---|
| Protein sequence | MANGTQDGIQ IRGSIPAIVT PMLEDGSLDL PAFRKLIDWH IAEGTDAIVV VGTSGESATL
NVEEHILMIR TAVEHAAMRI PIIAGAGGNS TAEAIELTKH AKAVGADATL QVVPYYNKPT
QEGMYRHFKS IAEAVDLPVI LYNVPGRTVA DMAHETTLRL AQVPGIIGVK EATGNIDRAA
HLIKAAPKHF AIYSGDDPTA IALMLLGGHG NISVTANVAP RAMSDLCRAA LAGDVATARA
LHMKLLSLHK NLFIEANPIP VKWALQAMGK MQGGIRLPLT PLDERCHDVV RSALVEAGVL
A
|
|---|
| |