Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2124 |
Symbol | |
ID | 4310257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2335237 |
End bp | 2337897 |
Gene Length | 2661 bp |
Protein Length | 886 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638149949 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_774014 |
Protein GI | 115352175 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGC TGTCGCCCGA GGCCTTCGCT GGCCACACCC CGATGATGCA GCAGTACCTG CGCATCAAGG CCGATCACCC CGACACGCTC GTCTTCTATC GGATGGGCGA CTTCTACGAG CTGTTCTTCG AAGACGCGGA GAAGGCCGCG CGCCTGCTCG ACCTGACCCT CACGCAGCGC GGCGCATCGG CCGGCACGCC GATCAAGATG GCCGGCGTCC CGCATCACGC GGTCGAACAG TATCTGGCGA AACTCGTGAA GATGGGCGAA TCGGTCGCGA TCTGCGAGCA GATCGGCGAC CCGGCCACAT CGAAAGGGCC GGTCGAGCGC AAGGTCGTGC GCGTCGTCAC GCCCGGCACG CTGACCGATG CCGCCCTGCT GTCCGACAAG AACGACGTCT ACCTGCTTGC AATGTGCACG GGCCACAACA AGCGCGGCGT CGCGGTCAAC ATCGGCCTCG CATGGCTGAA CCTCGCGAGC GGCGCACTGC GGCTCGCCGA AATCGAACCC GACCAGCTCG GCACCGCGCT CGAACGCATC CGCCCTGCCG AGATCCTGAC GGCGGACGGC GCAACCGACG CGGTGCCCGC CGGCGCCGGC GCGATCAAGC GCGTACCGGC ATGGCACTTC GACATCGCAT CGGGCACGCA GCGCCTGTGC GACCAGCTCG ACGTCGCGGG CCTCGACGGC TTCGGCGCGC ATTCGCTGAC GAGCGCATGC GGCGCCGCGG GCGCGCTGCT GCTGTACGCG GCGGCCACGC AGGGCCAGCA ACTGCGTCAC GTGCGCAGCC TGAAGGTCGA GAACGAAACG GAATACATCG GGCTCGATCC GGCGACGCGC CGCAACCTCG AGCTGACCGA AACGCTGCGC GGCACCGAAT CGCCGACGCT GTACTCGCTG CTCGACACGT GCTGCACGAC GATGGGCAGC CGCCTGCTGC GTCACTGGCT GCATCACCCG CCGCGCGCGT CGGTCGCCGC GCAATCGCGC CAGCAAGCGA TCGGCGCACT GCTCGATGCG CCCGCGGACG CGAGCCTCGA CGCACTGCGC AGCGCGCTGC GCCAGATCGC CGACGTCGAA CGGATCACCG GGCGTCTCGC GCTGCTGTCC GCGCGGCCGC GCGACCTGTC GAGCCTGCGC GATACGTTCG CCGCGCTGCC GGCGCTGCGT GAGCGCATCA GCGCGATCGT CGCGAACGCG GATGCGCTCA CGCGCGTCGA CGCGGCGCTC GCACCGCCCG CCGAATGCCT CGACCTGCTG ACGAGCGCGA TCGCCCCCGA GCCGGCCGCG ATGGTGCGCG ACGGCGGCGT GATCGCACGC GGCTACGACG CGGAGCTCGA CGAGCTGCGC GACATCTCCG AGAACTGCGG CCAGTTCCTG ATCGATCTCG AAGCGCGCGA GCGCACCCGC ACGGGCATCG CGAACCTGCG CGTCGAATAC AACAAGGTGC ACGGCTTCTA CATCGAGGTC ACGCGCGGCC AGACCGACAA GGTGCCCGAC GACTATCGCC GCCGCCAGAC GCTGAAGAAT GCCGAGCGCT ACATCACGCC CGAACTGAAG ACCTTCGAGG ACAAGGCGCT TTCCGCGCAG GAACGCGCAC TGGCCCGCGA GCGCGCGCTG TACGACGGCG TGCTGCAGGC GCTGCTGCCG TTCATTCCCG AATGCCAGCG CGTCGCATCG GCGCTCGCGG AGCTTGACGT GCTCGCCGCG TTCGCCGAGC GTGCACGCAC GCTCGACTGG GTCGCACCGA CCTTCACCGA CGAAATCGGC ATCGAGATCG AACAGGGGCG CCATCCGGTC GTCGAAGCGC AGGTCGAGCA GTTCATCGCG AACGACTGCC GGTTCGGCGC CGAGCGCAAG CTGTTGCTGA TCACCGGCCC GAACATGGGC GGTAAGTCGA CGTTCATGCG CCAGACGGCG CTGATCGCAC TGATGGCGTA TGTCGGCAGC TACGTGCCCG CGAAGTCGGC CTGCTTCGGC CCGATCGACC GCATCTTCAC GCGGATCGGC GCGGCCGACG ACCTCGCCGG CGGCCGCTCG ACGTTCATGG TCGAGATGAC CGAAGCCGCC GCGATCCTCA ACGACGCGAC GCCGCAAAGC CTCGTGCTGA TGGACGAAAT CGGCCGCGGC ACGTCGACGT TCGACGGCCT CGCGCTTGCA TGGGCCATCG CGCGTCACCT GCTCGCGCAA AACGGCTGCT ACACGCTGTT CGCGACGCAC TACTTCGAGC TGACGCAACT GCCGGCCGAA TTCCCGCAAG CGGCGAACGT CCACCTGTCG GCCGTCGAGC ACGGCCACGG CATCGTGTTC CTGCACGCAG TCAACGAAGG TCCGGCGAAC CAGAGCTACG GGCTGCAGGT TGCGCAGCTC GCGGGCGTAC CGGCGCCGGT GATCCGTGCC GCACGCAAGC ATCTCGCGTA TCTCGAGCAG CAGTCGGCCA CGCAGAACAC GCCGCAGCTC GATCTCTTCA GCGCGCCGCC CGCCGCGGCG GCCGACGAAC TCGAATGCGC GGATGCGCCG GCGGTCTCCG CCCTCCCGCA TCCGGCGCTC GAAAAGCTGC GCGACATCGA TCCCGACGAC CTCAAGCCGC GCGACGCGCT CGACCTGCTG TACGAACTGC GCACGCTCGT CCGCTCGCAC GATGCCGACG GGCACGCATA A
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Protein sequence | MTTLSPEAFA GHTPMMQQYL RIKADHPDTL VFYRMGDFYE LFFEDAEKAA RLLDLTLTQR GASAGTPIKM AGVPHHAVEQ YLAKLVKMGE SVAICEQIGD PATSKGPVER KVVRVVTPGT LTDAALLSDK NDVYLLAMCT GHNKRGVAVN IGLAWLNLAS GALRLAEIEP DQLGTALERI RPAEILTADG ATDAVPAGAG AIKRVPAWHF DIASGTQRLC DQLDVAGLDG FGAHSLTSAC GAAGALLLYA AATQGQQLRH VRSLKVENET EYIGLDPATR RNLELTETLR GTESPTLYSL LDTCCTTMGS RLLRHWLHHP PRASVAAQSR QQAIGALLDA PADASLDALR SALRQIADVE RITGRLALLS ARPRDLSSLR DTFAALPALR ERISAIVANA DALTRVDAAL APPAECLDLL TSAIAPEPAA MVRDGGVIAR GYDAELDELR DISENCGQFL IDLEARERTR TGIANLRVEY NKVHGFYIEV TRGQTDKVPD DYRRRQTLKN AERYITPELK TFEDKALSAQ ERALARERAL YDGVLQALLP FIPECQRVAS ALAELDVLAA FAERARTLDW VAPTFTDEIG IEIEQGRHPV VEAQVEQFIA NDCRFGAERK LLLITGPNMG GKSTFMRQTA LIALMAYVGS YVPAKSACFG PIDRIFTRIG AADDLAGGRS TFMVEMTEAA AILNDATPQS LVLMDEIGRG TSTFDGLALA WAIARHLLAQ NGCYTLFATH YFELTQLPAE FPQAANVHLS AVEHGHGIVF LHAVNEGPAN QSYGLQVAQL AGVPAPVIRA ARKHLAYLEQ QSATQNTPQL DLFSAPPAAA ADELECADAP AVSALPHPAL EKLRDIDPDD LKPRDALDLL YELRTLVRSH DADGHA
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