| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2106 |
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| Symbol | |
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| ID | 4309402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2312697 |
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| End bp | 2314703 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638149930 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_773996 |
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| Protein GI | 115352157 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.416073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGAA AACTCACACT ATCGGCGATC CCGTTCGATC AGCCCATCAT CATGGTGGCC
GGCGCCTTCA TGGGGCTGGT CGTGCTGGGC ATCCTCGCCG CGCTGACGAT CACCGGCCGC
TGGAAGTGGC TGTGGACGGA GTGGCTGACG ACGGTCGACC ACAAGAAACT CGGCGTGATG
TACATCATCG TCGCGCTGAT CATGCTGCTG CGCGGCTTCG CCGACGCGAT CATGATGCGC
ATGCAGCTCG CGCTCGCGTA CAACGCGCCC GGCTACCTGC CGCCGCACCA CTATGACCAG
ATCTTCACGG CACATGGCGT GATCATGATC TTCTTCATGG CGATGGTGTT CATGGTCGGC
CTGATGAACC TGATCGTGCC GCTGCAGATC GGCGCGCGCG ACGTCGCGTT CCCGTTCATC
AACTCGCTGT CGTTCTGGAT GACGGCGGTC AGCGCGATCC TGATCAACGT GTCGCTCGTG
ATCGGCGAGT TCGCGCAGAC GGGCTGGCTC GCGTATCCGC CGCTGTCGGA GCTGCAGTAC
AGCCCGGGGG TAGGGGTCGA CTACTACCTG TGGGCGTTGC AGATCTCGGG CGTCGGCACG
CTGCTGACCG GCGTGAACTT CTTCGTGACG ATCATCAAGA TGCGCGCGCC CGGCATGACG
CTGATGAAGA TGCCGGTGTT CACGTGGACG GCCCTCTGCA CGAACGTGCT GATCATGGCG
TCGTTCCCGA TCCTGACCGC GACGCTCGCG CTGCTCGGCC TGGACCGTTA TCTCGGCATG
CACTTCTTCA CGAACGAAGC CGGCGGCAAC GCGATGCTGT ACCTGAACCT GATCTGGGCG
TGGGGCCATC CGGAGGTGTA CATCCTGATC CTGCCGGCGT TCGGCATCTT CTCGGAAGTG
ATCGCGACGT TCTCGAAGAA GCCGCTGTTC GGCTACAAGA CGATGGTGTA CGCGACCTGC
GCGATCATGG TGCTGTCGTT CCTCGTGTGG CTGCATCACT TCTTCACGAT GGGGTCCGGT
GCGAACGTGA ACGCGTTCTT CGGCATCATG ACGATGATCA TCGCGATCCC GACCGGCGTG
AAGGTGTTCA ATTGGCTGTT CACGATGTAC CGCGGCCGGA TCGAATTCAC GACGCCCGTG
CTGTGGACGA TCGGCTTCAT GGTCACGTTC ACGCTCGGCG GCATGACCGG CGTGATGATG
GCGATCCCGG GCGCGGACTT CGTGCTGCAC AACAGCCTGT TCCTGATCGC GCACTTCCAC
AACGTGATCA TCGGCGGCGT GCTGTTCGGT TATCTCGCCG GCTTCAACTA CTGGTTCCCG
AAGGCGTTCG GCTTCAAGCT GAACGAGAAG CTCGGCAAGG CCGCGTTCTG GTTCTGGCAG
GTCGGCTTCT ACGTCGCGTT CGTGCCGCTC TACGTGCTCG GCTTCATGGG CATGACGCGT
CGCCTGAACC ACTACGACAA CCCGGCGTGG CATCCGTGGC TGCTGGTCGC CGCGTTCGGC
GCCGTGCTGA TCGCGATCGG CATCGCATGC CAGCTGCTGC AACTGGTCGT CAGCATCCGC
AACCGCAACT TGCCCGCGTA TCGCGACACG ACGGGCGATC CGTGGGGCGG CCGCACGCTG
GAATGGGCGA CCTCGTCGCC GCCGGCCGAC TACAACTTCG CGGTGCTTCC GCACGTGCGC
ACGCTGGACG CGTATGCCGA CATGAAGGCA CGCGGCGACG GCCGGCCGAA CCCGGCGACG
ATCCGCGACA TCCACATGCC GTCGAACACA TGTGCGGGTC TCGTCATCGC GGTCTTCAGC
CTGGTGCTCG GCTTCGCGCT GGTATGGCAC ATCTGGTGGA TGGCGATCGG CGGACTGGTC
GGCATCATCG CGACGCTCGT GATCTATAGC TCGCGTGACA ACGACGGCTA TTACATCCCG
GCGTCGAAAG TGCGCAAGAT CGAAGAGAAG CAACCGGCGG CGCGCGTGGC CACGCGTGTC
GACGACGTGG AACTGGAGGC CAACTGA
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| Protein sequence | MFGKLTLSAI PFDQPIIMVA GAFMGLVVLG ILAALTITGR WKWLWTEWLT TVDHKKLGVM
YIIVALIMLL RGFADAIMMR MQLALAYNAP GYLPPHHYDQ IFTAHGVIMI FFMAMVFMVG
LMNLIVPLQI GARDVAFPFI NSLSFWMTAV SAILINVSLV IGEFAQTGWL AYPPLSELQY
SPGVGVDYYL WALQISGVGT LLTGVNFFVT IIKMRAPGMT LMKMPVFTWT ALCTNVLIMA
SFPILTATLA LLGLDRYLGM HFFTNEAGGN AMLYLNLIWA WGHPEVYILI LPAFGIFSEV
IATFSKKPLF GYKTMVYATC AIMVLSFLVW LHHFFTMGSG ANVNAFFGIM TMIIAIPTGV
KVFNWLFTMY RGRIEFTTPV LWTIGFMVTF TLGGMTGVMM AIPGADFVLH NSLFLIAHFH
NVIIGGVLFG YLAGFNYWFP KAFGFKLNEK LGKAAFWFWQ VGFYVAFVPL YVLGFMGMTR
RLNHYDNPAW HPWLLVAAFG AVLIAIGIAC QLLQLVVSIR NRNLPAYRDT TGDPWGGRTL
EWATSSPPAD YNFAVLPHVR TLDAYADMKA RGDGRPNPAT IRDIHMPSNT CAGLVIAVFS
LVLGFALVWH IWWMAIGGLV GIIATLVIYS SRDNDGYYIP ASKVRKIEEK QPAARVATRV
DDVELEAN
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