| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2098 |
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| Symbol | |
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| ID | 4309394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2306513 |
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| End bp | 2307928 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638149922 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_773988 |
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| Protein GI | 115352149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACC GTACGCTCGC TGCATGGCTC GGCAGCGTCG CGCTGCTCGC CGGCTGTTCG
TTCGCGCCGA CGTATCACGC GCCGGCCGTG CCGGTGCCGG CCGCGTTTCG CGAAACCGGC
CCGTGGGTCG ATGCCGCCCC GGCCGATCGC CTGCCGCGCG ACGGCTGGTG GCGCGTGTAC
GGCGACGCGA CACTCGACCG GCTCGAGCCG CTCGTCGCAC GCGCGAATCC GGACCTCGCC
GCCGCCGTCG CACGGCACGA CGAAGCGGCC GCATTGTTCG ACGAGGCGCA CGCCGCGTTG
CTGCCGACCA TCGGCATCGG CGCCGAGACC GACCGCGACC GGCAGTCCGC GCGCCGGCCG
CTGCGCGGCA GCGGACAGCC CGACGTCTAC GAATCGAACA CGCTCGACGC CGGCCTCGGT
TACGACATCG ATCTGTGGGG CAAGGTCCGC AACACGGTCG CTGCCGGCCG CGACAACGCG
CAAGCCGCGG CCGATGATCT CGCATCCGTG CGGCTCAGCC TGCAGGCCCG CGTCGCCAGC
ACCTACTTCG ACCTCGCGGG ACTCGATCGC GAAGCGGACT CGCTCGCGCA GACGATCGAT
GCGTATCGCC GTGCGTGGCA ACTGACGGTC AGCCGCCATC GCGGCGGCCT CGCATCGGGG
CTCGACGTGT CGCGCGCGCA AACGCAGCTC GCGCTCGCGC AGGCGCGCGC ATCCGACATC
GCCGCGCGCC GTGCGCTCGA CGAGCATGCG ATCGCCGTGC TCGTCGGCGT ATCCGCGTCG
ACGTTCTCGC TGCCGGCCGC CGCCGCGCTG CCCGCCGTGC CGTCGATTCC GACCGGGCTC
GCGTCGACGC TGCTCGAACG CCGTCCGGAC ATCGCCGCCG CCGAACGCCG CGTCGCGGCC
GCGAACGCAC GGATCGGCGT CGCGCGCGCC GCGTACTTCC CTGACCTGTC GCTCGGCCTC
GACGCGGGCT TCCAGAGCGA CACGTTCTCG CCGTGGCTCG CCGCACCGAA CGAAATCTGG
TCGATCGGGC CGCGCCTCGC GACGACACTG TTCGACGGCG GCCTGCGTGC GGCGGGTGTA
CGCCACGCGC GCGCGCAGTT CGCCGAACAG GGCGCACGTT ACCGAAGCGT CGTACTGGCG
GCGTTCCGCG AAGTCGAGGA CGATCTCGCG CTGCTGCACC GGCTCGGAGA CGAATCGGCC
CAGGACGACG CGGCGCTCGT CGCGGCGCAG CAGTCGCTTG CGCTTGCAAT GTCGCGCTAT
CGCGACGGCG CCGTCAGCTA TCTCGACGTG GTCACCGCGC AGACCACCGA GCTCGATACG
CAGATCGCGT CGCTCGACGT CGATGCCCGA CGCCTGCAGG CGTCCGTCGC GCTCGTACGC
GCGCTCGGCG GCGGCTGGCG CGACGCGCGT TCATGA
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| Protein sequence | MADRTLAAWL GSVALLAGCS FAPTYHAPAV PVPAAFRETG PWVDAAPADR LPRDGWWRVY
GDATLDRLEP LVARANPDLA AAVARHDEAA ALFDEAHAAL LPTIGIGAET DRDRQSARRP
LRGSGQPDVY ESNTLDAGLG YDIDLWGKVR NTVAAGRDNA QAAADDLASV RLSLQARVAS
TYFDLAGLDR EADSLAQTID AYRRAWQLTV SRHRGGLASG LDVSRAQTQL ALAQARASDI
AARRALDEHA IAVLVGVSAS TFSLPAAAAL PAVPSIPTGL ASTLLERRPD IAAAERRVAA
ANARIGVARA AYFPDLSLGL DAGFQSDTFS PWLAAPNEIW SIGPRLATTL FDGGLRAAGV
RHARAQFAEQ GARYRSVVLA AFREVEDDLA LLHRLGDESA QDDAALVAAQ QSLALAMSRY
RDGAVSYLDV VTAQTTELDT QIASLDVDAR RLQASVALVR ALGGGWRDAR S
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