| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2097 |
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| Symbol | |
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| ID | 4309393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2305345 |
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| End bp | 2306520 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149921 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_773987 |
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| Protein GI | 115352148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.902105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTG AATTCGACGT CCGTCCCCCC GCCACGCCGC GTTACCTGAA ACCGCTCGCG
ATCGCCGGCG TGATCGCGGC ACTCGCCGCC GCCGCGGCCG GCGTCGTCGA ACGCGCGCAC
GATGCGCGTG AAGTCGCCGC GTGGACCGCC AGCCAGGCGA TCCCGACCGT CGCGACGGTC
GCGCCGCAGC CGGCCGCGGC CGATGCGCTG GTGCTGCCAG GCCGCCTCGA CGCGTATGTC
GACGCGCCGA TCTACGCGCG CGTGCCCGGC TACCTGCATG CGTGGTACGT CGACATCGGC
GCGCACGTGA AGGCCGGCCA GTTGCTCGCG TCGATCGACA CGCCCGACCT CGACCAGCAG
CTGCAGCAGG CGCGCGCCGA CCTGCAAAGC GCGACGGCGA ACGAACGGCT CGCGGCCGTC
ACCGCCGCGC GCTGGTCCGA GATGCTCGCG CAGGATTCGG TGTCGCGGCA GGAAGCCGAC
GAGAAGCGCA GCGATCTCGA TGCGAAACGC GCGGCCGTGG CCGCCAGCAC CGCGAACGTG
CGTCGGCTCG AGGCGCTCGA ATCGTTCAAG CGCCTCACCG CACCGTTCGA CGGCGTCGTG
ACCGCGCGCA AGACCGATGT CGGCGCGCTG ATCGACGCGG GCAGCGGCAA CGGCGCCGAA
CTCTTCACCG TCTCGGATGC ACGGCGGCTG CGGCTCTACG TCCATATTCC GCAGGACGAC
GCGGGCGCGA TCCGTGCGGG CATGCATGTC GCGCTGACCG TGCCCGAGCG TCCCGGCATG
ACGTTCGATG CGACGCTCGC CGATTCCGCC CAGGCGATCG ATCCGGCTTC CGGCACGCTG
CTCGCGCAGT TCTCGATCGC GAACCCGGCA GGCACGCTGT TCCCGGGCGA ATACGCGCAG
GTGCGGATCG CGGTGGCCAA CGCCGCGCAC GCGCTGACGA TTCCGGCGAG CACACTGATC
TTCCGCCACG ACGGGTTGCA GGTCGCCGTG CTCGACGCGA CCGGGCATGC GCGCTTGCGC
CACGTGTCGA TCGCGACCGA TCTCGGCACG CGCGTCGAGA TCGCGTCGGG GCTCGCGGCG
AGCGACCGCG TGATCGACAA TCCGCCCGAT TCGCTCGCGG ACGGCGACCC GGTGCGCATC
GCCGGCACCG CGACGAAGGA GCCTGCGCAT GGCTGA
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| Protein sequence | MSTEFDVRPP ATPRYLKPLA IAGVIAALAA AAAGVVERAH DAREVAAWTA SQAIPTVATV
APQPAAADAL VLPGRLDAYV DAPIYARVPG YLHAWYVDIG AHVKAGQLLA SIDTPDLDQQ
LQQARADLQS ATANERLAAV TAARWSEMLA QDSVSRQEAD EKRSDLDAKR AAVAASTANV
RRLEALESFK RLTAPFDGVV TARKTDVGAL IDAGSGNGAE LFTVSDARRL RLYVHIPQDD
AGAIRAGMHV ALTVPERPGM TFDATLADSA QAIDPASGTL LAQFSIANPA GTLFPGEYAQ
VRIAVANAAH ALTIPASTLI FRHDGLQVAV LDATGHARLR HVSIATDLGT RVEIASGLAA
SDRVIDNPPD SLADGDPVRI AGTATKEPAH G
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