| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2071 |
|---|
| Symbol | alr |
|---|
| ID | 4311644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2273236 |
|---|
| End bp | 2274306 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638149888 |
|---|
| Product | alanine racemase |
|---|
| Protein accession | YP_773961 |
|---|
| Protein GI | 115352122 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0787] Alanine racemase |
|---|
| TIGRFAM ID | [TIGR00492] alanine racemase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC CGATCTCCGC CACCATCCAT ACCGCCGCTC TCGCGAACAA TCTCTCCGTC
GTCCGCCGCT TTGCCGGCCC GTCCAAGGTC TGGACGGTCG TCAAGGCCAA CGCGTACGGC
CACGGTCTCG CGCGCGTGTT TCCCGGCCTG CGCGGCACCG ACGGCTTCGG CCTGCTCGAC
CTCGACGAGG CCGTGAAGCT GCGCGAGCTC GGGTGGGCCG GTCCGATCCT GCTGCTCGAA
GGGTTCTTCC GCTCGACCGA CATCGACGTG ATCGACCGCT ACAGCCTGAC GACCACCGTC
CACAACGACG AGCAGATGCG GATGCTGGAG ACGGCCCGGC TGTCGAAGCC CGTCAACGTG
CAGCTCAAGA TGAACAGCGG CATGAACCGA CTCGGCTACG CGCCGGAGAA ATACCGCGCC
GCGTGGGAGC GCGCCCGTGC GTGCCCCGGC ATCGGCCAGA TCACGTTGAT GACCCATTTT
TCGGATGCCG ACAACGAGCG CGGCGTCGCC GAGCAGCTCG CGACGTTCGA GCGCGGCGCG
GAAAACATCG CCGGCGCGCG CAGCCTCGCG AATTCGGCGG CCGTGCTGTG GCATCCGGAT
ACGCACTTCG ACTGGGTGCG GCCGGGGATC ATCCTGTACG GCGCGTCGCC GTCGGGACTG
TCGGCCGACA TCGCCGACAC CGGGCTGAAG CCCGCGATGA CGCTCGCGTC CGAGCTGATC
GCGGTGCAGA CGATCGCGAA GGGGCAGGCG ATCGGCTATG GCTCGACGTT CTCCGCGCCG
GCCCAGATGC GCATCGGCGT CGTCGCGTGC GGTTACGCGG ACGGCTATCC GCGCGTCGCG
CCGGAAGGCA CGCCGGTGAT CGTCGACGGC ATCCGCACGC GGATCGTCGG CCGCGTGTCG
ATGGACATGA TCACCGTCGA CCTCACGCCG TGCCCGCAGG CCGGAGTCGG CGCGCGCGTC
GAGCTGTGGG GCAACACGCT GCCGATCGAC GACGTCGCGC GCCATTGCGG GACCATCGGC
TATGAACTGA TGTGCGCGGT CGCCGGCCGC GTACCGGTGC GCGCGGAATA A
|
|---|
| Protein sequence | MPRPISATIH TAALANNLSV VRRFAGPSKV WTVVKANAYG HGLARVFPGL RGTDGFGLLD
LDEAVKLREL GWAGPILLLE GFFRSTDIDV IDRYSLTTTV HNDEQMRMLE TARLSKPVNV
QLKMNSGMNR LGYAPEKYRA AWERARACPG IGQITLMTHF SDADNERGVA EQLATFERGA
ENIAGARSLA NSAAVLWHPD THFDWVRPGI ILYGASPSGL SADIADTGLK PAMTLASELI
AVQTIAKGQA IGYGSTFSAP AQMRIGVVAC GYADGYPRVA PEGTPVIVDG IRTRIVGRVS
MDMITVDLTP CPQAGVGARV ELWGNTLPID DVARHCGTIG YELMCAVAGR VPVRAE
|
|---|
| |