Gene Bamb_2068 details

Gene Information

• Locus tag: Bamb_2068
• ID: 4311641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2269323
• End bp: 2271254
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638149885
• Product: ABC transporter related
• Protein accession: YP_773958
• Protein GI: 115352119
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCGTT TCAATCAGTT CAGCCTTGCT CGAGGCACCA AACCGCTGTT CGAGTCGGCC 
TCGTTCGTGC TCAATCCCGG TGAAAAGGCC GGCCTGATCG GCGCGAACGG CGCCGGTAAG 
TCGACACTGT TCTCGGTCCT GCGCGGCGAG CTGCATTCCG ACGCCGGCGA TTTCTCGATG 
CCGCCGTCGT GGCGGATCGC CCACGTGTCG CAGGAAACGC CCGCGGTCGA CCGCTCGGCG 
CTCGACTACA CGCTCGACGG CGACACCGCG CTGCGCGAGA TCGAGGCGCG CATCGCCGCC 
GCGTCGGCCG CGCATGACGG CGCGGCCGAA GCCGACGCGC ACGCGGCGTT CGCCGATGCC 
GACGGCTATA CCGCGCCGGC GCGCGCCGAG GCGCTGTTGC TCGGCCTCGG CTTCACGCTT 
GCGCAGACGC GCGAGTCGGT CGCCAGCTTC TCCGGCGGCT GGCGCATGCG CCTGAACCTC 
GCGCAGGCGC TGATGTGCCG CTCCGACCTG CTGCTGCTCG ACGAACCGAC GAACCACCTC 
GACCTCGACG CGATCGTCTG GCTCGAAGAC TGGCTGCACC GCTACGCCGG CACGCTCGTC 
GTGATCTCGC ACGACCGCGA ATTCCTCGAC TCGATCTGCA ACGTCACGCT GCATCTGGAA 
AATCGCCAGG TGAAGCGCTA CGGCGGCAAC TACTCGCAAT TCGAAGTGCT GCGCGCGCAG 
CAGCTTGCGC TGCAGCAAAA CGCATACGAA AAGCAGCAGA AGACGATCGA GCACCTGCAG 
AGCTTCGTCG ACCGCTTCAA GGCCAAGGCC AGCAAGGCCA AGCAGGCGCA GAGCCGGATG 
AAGGCGCTCG AGAAGATGGA GCTGATCGCG CCCGCGCACA TCGCGTCGCC GTTCACGTTC 
GAGTTCCGCA CGCCCGACGC CGCGCCGAAC CCGATGATGG TGATGGAAGA CGTCCGCTGC 
GGCTACCATG CCGACGACGG CACGGACATC CCGATCGTCG AACGCGTGGC GCTGTCGATC 
CAGAATGGCC AGCGCATCGG CCTGCTTGGC GCGAACGGCC AGGGGAAATC GACGCTGATC 
AAGACGCTGG CCGGCACGCT CGCGCCGCTG TCGGGCCACG TGCGCGACGG CAAGGGCCTG 
ACGATCGGCT ATTTCGCGCA GCATCAGCTC GAAACGCTGC GCGAGGACGA TTCGCCGCTC 
GCGCATCTCG CACGGCTCGC GCCCGACACG CGCGAGCAGG AACTGCGCGA CTTTCTCGGC 
GGCTTCAATT TCTCCGGCGA GATGGCGACG AGCCCGGTCG GCCCGTTCTC CGGCGGCGAG 
AAAGCGCGGC TCGCGCTAGC GCTGATCATT TGGCAGAAGC CGAACCTGCT GCTGCTCGAC 
GAGCCGACCA ACCACCTCGA CCTCGAAACG CGTCACGCGC TGACGATGGC GCTCGCGCAG 
TTCGAAGGCA CGCTGATCCT CGTCTCGCAC GACCGCCACC TGCTGCGCGC GACCACCGAT 
CAGTTCATGC TCGTCGCGAA GCATCGCCTG CAGCCGTTCG ACGGCGACCT CGACGATTAC 
CGCGACTGGC TGCTGCAGCA CGCGGCCGAG CAGCGCGCGG CCGCGAAGGC CGACGGCGCG 
GCGGCGACGG GCGCCGATCC GGGCGTCAAC CGCAAGGACC AGAAGCGCCA GGCGGCCGAG 
GAGCGCCAGC GCCTGTCGCA GCTGAAAAAG CCGCTGCAGA ACCGCATCAC GAAGCTCGAA 
AAGGAAATGG AAACGCTGCA CGCCGAGAAG GCGCGCCTCG ATGCGTTCGT CGCCGATCCG 
GCGAGCTACG AGGCCGCGCG CAAGACGGAG CTGACCGACG CGATCCGCAA GCTCGGCGAG 
GTCAATAGCC GGCTCGAAAC GGTCGAGGCC GACTGGCTCG CCGTGCACGA AGAGCTCGAG 
CAGATCGGCT GA 

 

Protein sequence

MIRFNQFSLA RGTKPLFESA SFVLNPGEKA GLIGANGAGK STLFSVLRGE LHSDAGDFSM 
PPSWRIAHVS QETPAVDRSA LDYTLDGDTA LREIEARIAA ASAAHDGAAE ADAHAAFADA 
DGYTAPARAE ALLLGLGFTL AQTRESVASF SGGWRMRLNL AQALMCRSDL LLLDEPTNHL 
DLDAIVWLED WLHRYAGTLV VISHDREFLD SICNVTLHLE NRQVKRYGGN YSQFEVLRAQ 
QLALQQNAYE KQQKTIEHLQ SFVDRFKAKA SKAKQAQSRM KALEKMELIA PAHIASPFTF 
EFRTPDAAPN PMMVMEDVRC GYHADDGTDI PIVERVALSI QNGQRIGLLG ANGQGKSTLI 
KTLAGTLAPL SGHVRDGKGL TIGYFAQHQL ETLREDDSPL AHLARLAPDT REQELRDFLG 
GFNFSGEMAT SPVGPFSGGE KARLALALII WQKPNLLLLD EPTNHLDLET RHALTMALAQ 
FEGTLILVSH DRHLLRATTD QFMLVAKHRL QPFDGDLDDY RDWLLQHAAE QRAAAKADGA 
AATGADPGVN RKDQKRQAAE ERQRLSQLKK PLQNRITKLE KEMETLHAEK ARLDAFVADP 
ASYEAARKTE LTDAIRKLGE VNSRLETVEA DWLAVHEELE QIG