| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2055 |
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| Symbol | |
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| ID | 4311628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2251285 |
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| End bp | 2253357 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638149872 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_773945 |
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| Protein GI | 115352106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACCA AATTAACCGT CAAGAATCCG CGTCCGGCGT CGCCGACCCG CGCACCCGTC
CGCTCCGGCA GCCTCGTCGC TCGCAAGGCG GTGCGCCCCG CCGGGCCGCC CGCGGCCGAC
AAGCCGCCGC GCCCGAAGAA GGCCGCCGCG CCGGCAGCCG CCGGCGAACG CGCGTTCAAG
CCGCGCGGCG CGGAACGCCC GGGTGCGGAT CGCGCGCCGG CGAAGCGCGC ACCGCGTGAC
GGCGGTGCCG AGCGCGGCGA CGCGCGTCCC GCGCGTCCGT ATCGCAGCGC CGAAGGTCAG
CCCGATGCGC GGCCGCGCCG CGCGGGCGCC GAAGGCGGTG CCCGCGCGCC GTATCGCGAC
AAGGCGGAGG GCTACGGCGA GAAGCGCAGC TTCGGCGAAC GCCGTACGTC GTCCGACCGC
CCGGCTCGCC GCAGCGATGA CGATACGCGG CCGCGCCGTG CAGGCGCGGA AGGCGGCGCA
CGCGCACCGT ATCGTGACAA GGCAACCGGC GAAGGCGCGA AGCGCAGTTT CGACGATCGC
CGTACGTCGT CCGACCGCCC GGCTCGCCGC AGCGACGACG ATACGCGGCC GCGCCGCGCA
GGCGCCGAAG GCGGTGCACG CGCGCCGTAT CGCGACAAGG CAACCGGCGA TGCGCCGAAG
CGCAGCTTCG GTGAACGCCG TACGTCGTCC GACCGTCCGG CACGCCGCGA CGACGATGCA
CGGCCGCGCC GCGCAGGTGC CGAAGGCGGT GCACGCGCAC CGTATCGCGA CAAGGCAACC
GGCGATGCGC CGAAGCGCAG CTTCGGTGAA CGCAGTACAT CGTCCGACCG ACCGGCACGC
CGCGACGACG ATACGCGGCC GCGTCGCGCA GGCGCCGAAG GCGGCGCTCG CGCACCGTAT
CGCGACAAGG CAACCGGCGA TGCGCCGAAG CGCAGCTTCG GCGAACGCCG TGCGCCGTCC
GACCGCCCAG CTCGCCGCAG CGATGACGAT ACGCGGCCGC GCCGCGCAGG CGCCGAAGGC
GGCGCACGCG CACCGTATCG TGACAAGGCA ACCGGCGATG CACCGAAGCG CAGCTTCGGT
GAACGCAGTA CATCGACCGA CCGACCGGCT CGCCGCAGCG ACGACGATGC ACGGCCGCGC
CGCGCAGGCG CCGAAGGCGG CGCACGCGCC CCCTATCGCG ACAAGGCAAC CGGCTACGGC
GAAAAGCGCA GCTTCGGCGA ACGCGGCAAC ACCGAGCGCC GCTCGACGGC CGCCGCGCCG
AAAGCCGCAC AACCGGTCAA GCACCGCGCC CCCGACATCG ATCACGGCGA CGAAACCGGC
CTGATGCGCC TGTCGAAGCG CATGTCCGAG CTCGGCCTGT GCTCGCGCCG CGAAGCCGAC
GAATGGATCG AAAAGGGCTG GGTGCTCGTC GACGGCGAAC GCATCGACAC GCTCGGCACC
AAGGTCCGTC CCGACCAGAA AATCGAGATC GACGAACGCG CGAGCGCCGC GCAGGCCGCA
CAGGTGACGA TCCTGCTGCA CAAGCCGGTC GGCTATGTGT CCGGTCAGGC GGAAGACGGC
TACGAGCCCG CGTCGGTGCT GATCACGCGC GCGAACCAGT GGAGCGGCGA CCGCTCGCCG
CTGCGCTTCT CGCCGCAGCA TCTGCACGCG CTCGCTCCGG CCGGCCGGCT CGACATCGAT
TCGACCGGCA TGCTCGTGTT GACGCAGAAC GGCCGGATCG CGAAGCAACT GATCGGCGAG
CAGTCGGACA TCGACAAGGA GTACCTGGTG CGCGTGCGCT TCGGCGAACG GCTGCTCGAC
ATCGACCAGC ACTTCCCCGC CGAATCGCTC GCGAAGCTGC GCCACGGCCT CGAACTCGAC
GGTGTCGCAC TGAAGCCCGC GATGGTGAGC TGGCAGAACG GCGAACAGCT GCGTTTCGTG
CTGCGTGAAG GCAAGAAGCG CCAGATCCGC CGGATGTGCG AACTGGTCGG TCTCGAAGTG
ATCGGCCTGA AGCGCGTGCG GATGGGCCGC GTGATGCTCG GCGCGCTGCC GCAAGGGCAA
TGGCGCTACC TGTCGCCCGA CGAGTCGTTC TGA
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| Protein sequence | MRTKLTVKNP RPASPTRAPV RSGSLVARKA VRPAGPPAAD KPPRPKKAAA PAAAGERAFK
PRGAERPGAD RAPAKRAPRD GGAERGDARP ARPYRSAEGQ PDARPRRAGA EGGARAPYRD
KAEGYGEKRS FGERRTSSDR PARRSDDDTR PRRAGAEGGA RAPYRDKATG EGAKRSFDDR
RTSSDRPARR SDDDTRPRRA GAEGGARAPY RDKATGDAPK RSFGERRTSS DRPARRDDDA
RPRRAGAEGG ARAPYRDKAT GDAPKRSFGE RSTSSDRPAR RDDDTRPRRA GAEGGARAPY
RDKATGDAPK RSFGERRAPS DRPARRSDDD TRPRRAGAEG GARAPYRDKA TGDAPKRSFG
ERSTSTDRPA RRSDDDARPR RAGAEGGARA PYRDKATGYG EKRSFGERGN TERRSTAAAP
KAAQPVKHRA PDIDHGDETG LMRLSKRMSE LGLCSRREAD EWIEKGWVLV DGERIDTLGT
KVRPDQKIEI DERASAAQAA QVTILLHKPV GYVSGQAEDG YEPASVLITR ANQWSGDRSP
LRFSPQHLHA LAPAGRLDID STGMLVLTQN GRIAKQLIGE QSDIDKEYLV RVRFGERLLD
IDQHFPAESL AKLRHGLELD GVALKPAMVS WQNGEQLRFV LREGKKRQIR RMCELVGLEV
IGLKRVRMGR VMLGALPQGQ WRYLSPDESF
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