Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2044 |
Symbol | |
ID | 4311617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2237496 |
End bp | 2239802 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638149861 |
Product | surface antigen (D15) |
Protein accession | YP_773934 |
Protein GI | 115352095 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCAAAC CTCATCGCTT TGTACCTAAG ACAGTTGCAG CGGCCGCGCT CGCCGCGCAC GGCCTCGCGG CGCATGCAGC GGCACCGTTC GTGGTGCAAG ACATCAAGAT CGAGGGGTTG CAGCGCGTCG AAGCGGGTTC GGTGTTTGCC TACCTGCCGA TCAAGCAGGG CGATACCTTC ACCGACGACA AGGCATCCGA AGCAATTCGC GCGCTGTACG CGACGGGCTT CTTCAACGAC GTGCGCATCG CGACCCAGGG CAACGTCGTG ATCGTGCAGG TGCAGGAGCG TCCGGCCATC GCGTCGATCG ACTTCACCGG CACGAAGGAA TTCGACAAGG ACAACCTGAC GAAGGCGCTG CGCGCGGTGG GTCTGGCCGA CGGCCGCTAC TACGACAAGG CGCTCGTCGA CAAGGCGGAG CAGGAGCTCA AGCGTCAGTA CCTGACGCGC GGCTTCTACG CGGCCGAGGT CAAGACGACG ATCACGCCGG TCGACGCGAA CCGCGTGTCG ATCCTGTTCG CGGTCGCCGA AGGCCCGAGC GCGAAGATCC GCCAGATCAA CTTCATCGGC AACAAGGCGT TCAGCACCAG CAAGCTGCGC GACGAGATGC AGCTGTCCAC GCCGAACTGG TTCTCCTGGT ACACGAAGAA CGACCTGTAC TCGAAGGAAA AGCTCACGGG CGACCTCGAG GCCGTGCGCT CGTACTACCT GAACCGAGGC TACCTCGAGT TCAACATCGA GTCGACCCAG GTGTCGATCT CGCCCGACAA GAAGGACATG TACCTGACGG TCACGCTGCA CGAAGGCGAG CCGTACACGG TGTCGGGCAT CAAGCTGTCG GGCAACCTGC TCGATCGCGA AGCCGAATTG ACCAAGCTGA TCAAGATCAA GCCGGGCGAT CGCTTCTCGG CCGAAAAGCT GCAGCAAACG ACGAAGTCGA TCGTCGACAA GCTCGGCGAA TACGGCTACG CATTCGCGAC CGTCAACGCG CAGCCGGACA TCGACCAGGC GAACCACAAG GTGAACCTGA ACCTCGTCGT CGATCCGAGC CGTCGTGTGT ATGTGCGCCG TATCAACGTG GTCGGCAACA CGCGTACGCG CGACGAAGTC GTGCGCCGCG AAATGCGCCA GCTCGAAAGC TCGTGGTTCG ATTCGAACCG CCTCGCGCTG TCGAAGGATC GCGTGAACCG TCTCGGCTAC TTCACCAACG TCGACGTGAC GACGGTGCCG GTCGAAGGCA CGAACGACCA GGTCGACGTG ACCGTGAAGG TCGATGAAAA GCCGACCGGC GCGATCACGC TGGGCGCGGG CTTCTCGTCG ACGGACAAGG TGGTGCTGTC GGCCGGCGTG TCGCAGGACA ACGTGTTCGG CTCGGGCACG AGCCTGTCGG TGAACGTCAA CACCGCGAAG AGCTACCGCA CGCTGACCGT CACGCAGGTC GACCCGTACT TCACGGTCGA CGGCATCAAG CGGATCACGG ACGTCTACTA CCGCACGTAC CAGCCGCTCT ACTATTCGAC GAGCTCGAGC TTCCGGATCA TCAGCGCGGG CGGCAACCTG AAGTTCGGCA TTCCGTTCTC GGAAGTCGAC ACCGTCTACT TCGGCGCGGG CTTCGAGCAG AACCGTCTCG ATGTCGACTC GAACACGCCG CAGAGCTACC AGGATTACGT GAACCAGTTC GGCCGCGTGT CGAACACGGT GCCGCTGACC GTCGCGTGGT CGCGCGACGC GCGTGACAGC GCGCTGATCC CGAGCCGCGG CTACTTCACG CAAGCGAACG TCGAGTACGG CGTGCCGGTC GGCAAGATCC AGTACTACAA GGCCGACCTG CAGGCGCAGT ACTACTATTC GTTCTCGCGC GGCTTCATCC TGGGCATGAA CCTGCAAGGC GGCTACGGTA ACGGTATCGG CAACCCGTAC CCGATCTTCA AGAACTACTA CGCGGGCGGT ATCGGCTCGG TGCGTGGCTA CGAGCCGAGC TCGCTGGGCC CGCGCGACAC GAAGACGAAC GACCCGATCG GCGGTTCGAA GATGCTGGTC GGCAACATCG AGCTGACGTT CCCGCTGCCG GGCACCGGCT ACGACCGCAC GCTGCGCGTG TTCACGTTCC TCGACGGCGG TAACGTGTGG GGTAACGCGC CGGGCGGCAC GAGTACCGGC GCGAACGGCC TGCGTTACGG CTACGGCGTG GGTCTCGCGT GGATCTCGCC GATCGGCCCG CTGAAGCTGA GCCTCGGCTT CCCGCTGCAG AAGCATGAAG GCGACCAGTA CCAGAAATTC CAGTTCCAGA TCGGGACGGC GTTCTGA
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Protein sequence | MFKPHRFVPK TVAAAALAAH GLAAHAAAPF VVQDIKIEGL QRVEAGSVFA YLPIKQGDTF TDDKASEAIR ALYATGFFND VRIATQGNVV IVQVQERPAI ASIDFTGTKE FDKDNLTKAL RAVGLADGRY YDKALVDKAE QELKRQYLTR GFYAAEVKTT ITPVDANRVS ILFAVAEGPS AKIRQINFIG NKAFSTSKLR DEMQLSTPNW FSWYTKNDLY SKEKLTGDLE AVRSYYLNRG YLEFNIESTQ VSISPDKKDM YLTVTLHEGE PYTVSGIKLS GNLLDREAEL TKLIKIKPGD RFSAEKLQQT TKSIVDKLGE YGYAFATVNA QPDIDQANHK VNLNLVVDPS RRVYVRRINV VGNTRTRDEV VRREMRQLES SWFDSNRLAL SKDRVNRLGY FTNVDVTTVP VEGTNDQVDV TVKVDEKPTG AITLGAGFSS TDKVVLSAGV SQDNVFGSGT SLSVNVNTAK SYRTLTVTQV DPYFTVDGIK RITDVYYRTY QPLYYSTSSS FRIISAGGNL KFGIPFSEVD TVYFGAGFEQ NRLDVDSNTP QSYQDYVNQF GRVSNTVPLT VAWSRDARDS ALIPSRGYFT QANVEYGVPV GKIQYYKADL QAQYYYSFSR GFILGMNLQG GYGNGIGNPY PIFKNYYAGG IGSVRGYEPS SLGPRDTKTN DPIGGSKMLV GNIELTFPLP GTGYDRTLRV FTFLDGGNVW GNAPGGTSTG ANGLRYGYGV GLAWISPIGP LKLSLGFPLQ KHEGDQYQKF QFQIGTAF
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