Gene Bamb_2042 details

Gene Information

• Locus tag: Bamb_2042
• Symbol: lpxD
• ID: 4311615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 2235824
• End bp: 2236918
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638149859
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_773932
• Protein GI: 115352093
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.257153
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTGA CGCTCGAGGA ACTCGTAAAG CGGTTCGGCG GCGAGATCGC CGGCGACGCC 
CAGTGCAAGG TGAGCGGCCT CGCGCCGCTC GACCAGGCAG GCCCTCAGCA ACTCGCGTTT 
CTCGCGAATC CGAAGTACCT GTCGCAGGTC GAGACGACCC GCGCCGGCGC GGTGCTGATC 
GCGCCGAAGG ATCTCGAAAA GCTGCGCGCG GCTACTGGCG GCCAGGCGGC CGGCCCCCTC 
AATTTCATCG TGACGCCGAA TCCGTACGCG TATTTCGCGC GCGTCGCGCA GATGTTCATC 
GATCTCGCCA CGCCGCCGCG CGCGCCGGGC GTGCATCCGA GCGCGACGAT CGATCCGGCC 
GCACAGGTTG CCGCGAGCGC GGTGATCGGC CCGCACGTGA CGGTCGAGGC CGGCGCGGTG 
ATCGAGGACG GCGTGCAGCT CGACGCGAAC GTGTTCATCG GCCGCGGCAC GACGATCGGC 
GCGGGTTCGC ACCTGTATCC GAATGCATCG GTGTACCACG GCTGCAAGAT CGGCCCGCGC 
GCGATCATCC ATGCGGGTGC CGTGATCGGA TCCGACGGGT TCGGCTTCGC GCCGGATTTC 
GTCGGCGACG GCGATGCGCG CACCGGCAGC TGGGTCAAGA TCCCGCAGGT CGGCGGTGTG 
ACCATCGGCC CGGATGTCGA GATCGGCGCG AATACGACGA TCGATCGCGG CGCGATGGCG 
GACACCGTCA TCGACGAATG CGTGAAGATC GACAATCAGG TCCAGATCGG CCACAACTGC 
CGGATCGGCG CCTATACGGT GATCGCGGGC AGCGCCGGCA TCGCCGGCAG CACGACGATC 
GGCCGCCACT GCATGATCGG CGGCGCGGCG GGCATTGCCG GCCACGTGAC GCTCGGCGAC 
TATGTCATCA TCACCGCGAA GTCGGGCGTG TCGAAGTCGC TGCCGAAGGC CGGCATCTAC 
ACGAGCGCAT TCCCGGCCGT CGACCACGGC GAATGGAACC GGAGCGCCGC GCTCGTGCGC 
AACCTCGACA AGCTGCGCGA GCGCATCAAG GCGCTCGAAA CCGCACTGGC CGCCCAGGGC 
GGCACGGACG CCTGA 

 

Protein sequence

MALTLEELVK RFGGEIAGDA QCKVSGLAPL DQAGPQQLAF LANPKYLSQV ETTRAGAVLI 
APKDLEKLRA ATGGQAAGPL NFIVTPNPYA YFARVAQMFI DLATPPRAPG VHPSATIDPA 
AQVAASAVIG PHVTVEAGAV IEDGVQLDAN VFIGRGTTIG AGSHLYPNAS VYHGCKIGPR 
AIIHAGAVIG SDGFGFAPDF VGDGDARTGS WVKIPQVGGV TIGPDVEIGA NTTIDRGAMA 
DTVIDECVKI DNQVQIGHNC RIGAYTVIAG SAGIAGSTTI GRHCMIGGAA GIAGHVTLGD 
YVIITAKSGV SKSLPKAGIY TSAFPAVDHG EWNRSAALVR NLDKLRERIK ALETALAAQG 
GTDA