Gene Bamb_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2038 
SymbolrnhB 
ID4311611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2232547 
End bp2233200 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content70% 
IMG OID638149855 
Productribonuclease HII 
Protein accessionYP_773928 
Protein GI115352089 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.886397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCA TCCGTGTGCC ACGCCGCCGC GCGTCGGCCG ATCTGCAGGG CGGTTTCGAC 
TTCAGTCGGC CCGACGAGAT CGTCTGCGGC GTCGACGAAG CGGGCCGCGG CCCGCTCGCG
GGGCCGGTCG TGGCCGCCGC GGTGATCCTC GATCCCGCAC GGCCGATCGA CGGGCTCGAC
GATTCGAAGG CGCTGTCCGC GAAGAAGCGC GACGCGCTGT ACGACCTGAT CGTCGCGCGC
GCGAGCGCGT TTTGCGTCGC GTCGGCCAGC GTCGACGAAA TCGACACGCT GAACATCCTG
CACGCGACGA TGCTGGCGAT GAAGCGGGCC GTCGAGGGCC TGTCGGTGCT GCCGACGCTT
GCCCAGATCG ACGGCAACCG CTGTCCGACG TTGACGGTGC GTGCGGAGGC GATCGTCAGC
GGCGACGCGC TCGTGCCGAG CATCTCGGCC GCGTCGATTC TCGCGAAGGT CACGCGCGAC
CGCATGCTCG TCGATCTGCA TGAACGCTTC CCGGTGTACG GCTTCAACAT GCACGTGGGT
TACAGCACCC CGCAACACCT TGCCGCGCTG CGCGAGCACG GCCCGTGCGA AGTGCATCGG
CGCTCGTTCG CGCCCGTGCG CGAGGCGCTC GACCTGATGG CCGGTTCCCG CTGA
 
Protein sequence
MTAIRVPRRR ASADLQGGFD FSRPDEIVCG VDEAGRGPLA GPVVAAAVIL DPARPIDGLD 
DSKALSAKKR DALYDLIVAR ASAFCVASAS VDEIDTLNIL HATMLAMKRA VEGLSVLPTL
AQIDGNRCPT LTVRAEAIVS GDALVPSISA ASILAKVTRD RMLVDLHERF PVYGFNMHVG
YSTPQHLAAL REHGPCEVHR RSFAPVREAL DLMAGSR