| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2016 |
|---|
| Symbol | |
|---|
| ID | 4309058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2211236 |
|---|
| End bp | 2212228 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638149833 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_773906 |
|---|
| Protein GI | 115352067 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAC GCAGCTTTGC CAGCGCCGAG TACGCGATGA AGAAGAAGCG CACGCGGCGC
GAGAAGTTTC TTGCCGAAAT GGAACGCGTC GTGCCTTGGG CGCGCTTGAT CGCCGTGATC
GAGCCGCTGT ATCCCACGAG TGGACGCGTG GGCCGCCAGC CGGTGGGCGT ACCTCGCATG
CTGCGCATGT ACTGCCTGCA GCAGTGGTAC GGCCTGGCCG ACGAGGCGCT GGAAGACGCG
CTGTACGACA GCCAGGCCCT GCGCGACTTC GTGGGCATCG ACCTGTCGCG CGAGTCGGTG
CCTGACGCCA CCACGCTGCT CAAGTTCAGG CGACTGCTGC TGGTCAACGA CCTGACCAAG
GCGCTATTCG ATGAGATCAA CGCTCATCTG GCCGAGCAGG GCCTGCTCAT GCGTGCGGGC
ACCATCGTGG ACGCCACCAT CATTGCGGCG CCGAGTTCGA CGAAGAACGA AGGTAATGCG
CGAGACCCCG AGATGCACCA GACCAGGAAG GGCACCCAGT GGCACTTCGG GATGAAGGCG
CACATCGGCG TGGATGCCGA GTCGGGCCTG GTACACACGG TGGTCGGCAC GGCGGCCAAC
GTCAACGATG TGACGCAGGC CGGTGCGCTG CTGCATGGCG ATGAGATGGC CGCCCATGGG
GATGCCGGCT ACCGCGGCGT GCACAAGCGC GAGGAAGCGC AAAGGCCGCA CTGGCACGTG
GCGATGCAAC CGGGCAAGCG AAGGCAGTTG GACCTGACCC GCCAATGGGC ACAGCTGCTC
GAGCAGGCAG AACAACTGAA GGCGAGCATC CGAGCCAAGG TCGAGCATCC GTTCCACGTG
ATCAAGAACC TGTTCCGACA CAAGAAGGTC CGCTACAGGG GCCTGGCCAA GAACACGGCG
CAGTTGTTCA GCCTGTTCGG CCTGGCCAAC CTGGTGATCG CCAAGAGGTC GCTGTTGGCC
CTCTATGCCC GAGGTGCGTC TCGAGCGTGC TGA
|
|---|
| Protein sequence | MSQRSFASAE YAMKKKRTRR EKFLAEMERV VPWARLIAVI EPLYPTSGRV GRQPVGVPRM
LRMYCLQQWY GLADEALEDA LYDSQALRDF VGIDLSRESV PDATTLLKFR RLLLVNDLTK
ALFDEINAHL AEQGLLMRAG TIVDATIIAA PSSTKNEGNA RDPEMHQTRK GTQWHFGMKA
HIGVDAESGL VHTVVGTAAN VNDVTQAGAL LHGDEMAAHG DAGYRGVHKR EEAQRPHWHV
AMQPGKRRQL DLTRQWAQLL EQAEQLKASI RAKVEHPFHV IKNLFRHKKV RYRGLAKNTA
QLFSLFGLAN LVIAKRSLLA LYARGASRAC
|
|---|
| |