| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2011 |
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| Symbol | |
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| ID | 4309053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2207295 |
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| End bp | 2207999 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149828 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_773901 |
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| Protein GI | 115352062 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.264252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTTA AACGACCGCA GGTGCGCTAT GCCGATACGC CGCAGCCTGC CACCCCATAT
CAAGCTGCCG CCCAAGTGTG GGACGAGCGC ATCGGCTCGG CCCGCGTACA GGCGAAGAAC
TGGCGGCTGA TGGCCTTTGG CTGCCTAGTG CTGGCCTTGC TGATGGCCGG CGGCCTGGTG
TGGCGTTCGG CGCAGTCCAT CGTGACGCCC TACGTCATTG AAGTCGATCA GTCCGGCCAG
GTGCGTACCG TGGGCGAAGC CGCTACGCCG TACCGGCCCG CCGATGCGCA GATCGCGCAT
CACCTGGCGC GCTTCGTGAC GCTGGTGCGT TCGCTGTCCA TCGACCCCAT CGTCGTGCGG
CAGAACTGGC TCGATGCCTA TGACTACACC ACCGACAAGG GCGCGGCCGT GCTCAACGAC
TACGCGAGCA AGAACGATCC GTTCGCCCGC GTCGGCCGCG AGTCGGTGAC GGTGCAGATC
ACCAGCGTCA CGCGCGCGAG CGATGCCTCG TTCAACGTCC GCTGGACGGA GCAGCGGTTC
GTCAATGGCG TACCCGCTGG CACCGAACGC TGGAATGCCG TGCTTTCCAT CGTCCTGCAA
ACCCCGCGTA CCGAACAGCG CCTGCGCAAG AACCCGCTGG GGATCTACGT CAACGGCCTG
TCGTGGAGTC GCGAACTGGA TTCTTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFKRPQVRY ADTPQPATPY QAAAQVWDER IGSARVQAKN WRLMAFGCLV LALLMAGGLV
WRSAQSIVTP YVIEVDQSGQ VRTVGEAATP YRPADAQIAH HLARFVTLVR SLSIDPIVVR
QNWLDAYDYT TDKGAAVLND YASKNDPFAR VGRESVTVQI TSVTRASDAS FNVRWTEQRF
VNGVPAGTER WNAVLSIVLQ TPRTEQRLRK NPLGIYVNGL SWSRELDSSE GAKP
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