| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2010 |
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| Symbol | |
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| ID | 4309052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2205876 |
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| End bp | 2207270 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149827 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_773900 |
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| Protein GI | 115352061 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.411126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACG TGACCATCAT CGACCGATTC CTCGATACGT TCTCGCGCTA CATCGACTCC
GGGTTCGGGC TGCTGCAAGG CGAAGTGGCG TTCCTGACAG CCACGCTGAT CGTCATCGAC
ATGACCATCG CCGGCCTTTA TTGGGCCATG AGCCACGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGCTGCGCAA GGTGCTCTAC GTCGGTGCCT TCGCCTACAT CATCGGCAAC
TTCAACTGGC TGGCCGGGAT CGTTTTCCGC TCGTTCGCCG GCCTGGGCCT GACGGCCACC
GGCTCGGCCA TGACGATGGA GAACTTTCTT CAGCCGGGCC GGCTGGCCAA GACCGGTATC
GACGCGGGCG CACCGATTCT GGAGCAGATC GGCGACATGG CGGGCTTCCC CGAAGTCTTC
GTGAACATCG ACCCCATCGT GGTGATGTTC CTCGCCTGGC TCACCGTCAT CCTGTGTTTC
TTCGTGCTGG CGATCCAGCT TTTCATCACG CTGATCGAGT TCAAGCTGAC CACGCTCGCG
GGCTTCGTGC TGGTGCCGTT CGCGCTTTGG AACAAGACCT CGTTTCTCGC CGAAAAGGTT
CTCGGCAATG TGGTGTCGTC GGGCATCAAG GTCTTGGTGC TGGCCGTCAT CGTCGGCATC
GGCTCGGGCC TGTTCGCGGA GTTCCAGGTT CATCCCGACG AGCCTTCCAT CGACCACGCC
CTTGTCGTGA TGCTGGCCTC GCTCGCGTTG CTGGCGCTGG GCATCTTCGG CCCCGGCATC
GCCACGGGTC TGGTGTCCGG TGCGCCGCAG CTTGGCGCAG GCGCGATGGC GGGTGCCGCC
GTTGGTGCCG CCGGCACGGC CGTTGCCATC GGCGCCGCCG CGACTGGCTT GGGCGGTGCG
GTCGTGGCCG GGGCACGCAT GGCGCCTGCT GCCGCCAAGC TGGCTGGTGC CGGTGCGCGT
GCCGCCACCT CGGCGGCCGG CAGCGCACGC TTGGCGTTCC AGGCCGGTTC CGCCGCTGCG
GGCGGCGGCG CCAGGGGCGC AATGGCCGGC TCGAGCAATG TCGCCAAGAC CGGCGCGCAG
TCTTTCGGGC GCAGCGCTGC ATCCGGGGCT TCCGGCGCTG CGCAGAAGAT GACCGGCTCT
TTCCGTGCTG GATGGAACGG TACAGAGGCC GGTGGCGGCG CTGCGTCCGG TGCGGCTGGC
TCCGGTCAGG CGGCCGCAGG CGAAGCCACA GACAGCGCCG CCAGCTCGCA GAAGCAAGAG
CAGCCCGCCT GGGCCAAGCG GATGCACCGC CGCCAGCAGA TCACCCATGC CGCGACCACT
GCCGCACACA CGTTGCGCGG TGGCGATGGC GGCGGCTCCG GGCAAGGCCC GAGCCTGCGC
GGCTCCGACG ACTAA
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| Protein sequence | MNDVTIIDRF LDTFSRYIDS GFGLLQGEVA FLTATLIVID MTIAGLYWAM SHATGQGEDV
IAKLLRKVLY VGAFAYIIGN FNWLAGIVFR SFAGLGLTAT GSAMTMENFL QPGRLAKTGI
DAGAPILEQI GDMAGFPEVF VNIDPIVVMF LAWLTVILCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTSFLAEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQV HPDEPSIDHA
LVVMLASLAL LALGIFGPGI ATGLVSGAPQ LGAGAMAGAA VGAAGTAVAI GAAATGLGGA
VVAGARMAPA AAKLAGAGAR AATSAAGSAR LAFQAGSAAA GGGARGAMAG SSNVAKTGAQ
SFGRSAASGA SGAAQKMTGS FRAGWNGTEA GGGAASGAAG SGQAAAGEAT DSAASSQKQE
QPAWAKRMHR RQQITHAATT AAHTLRGGDG GGSGQGPSLR GSDD
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