Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2006 |
Symbol | |
ID | 4309048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2202054 |
End bp | 2202338 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149823 |
Product | putative conjugal transfer trbD transmembrane protein |
Protein accession | YP_773896 |
Protein GI | 115352057 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5268] Type IV secretory pathway, TrbD component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCG CCAACGAAGG AGCGCCGGCC TTCGCGTCCG GTTTCGAGAT CCCGCTGCAT CGCTCACTGA CCGAGCCGAT CCTGCTGGGC GGTGCGCCGC GCACCGTGGC GATTGCCAAC GGCACGCTGG CCGCCGCCGT CGGGCTGGGC CTGCAATTGT GGATTCCCGG TGTGGTGCTG TGGATCGTCG GCCATTCGCT GGCGGTGTGG GGCGCGCGCG TCGATCCGCA GTTCATGCAG GTCTTCGCCC GGCACATCAA GCACAAGCCG CTGCTGGACG TGTAG
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Protein sequence | MTAANEGAPA FASGFEIPLH RSLTEPILLG GAPRTVAIAN GTLAAAVGLG LQLWIPGVVL WIVGHSLAVW GARVDPQFMQ VFARHIKHKP LLDV
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