Gene Bamb_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1998 
Symbol 
ID4311764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2193969 
End bp2194433 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID638149815 
ProductMarR family transcriptional regulator 
Protein accessionYP_773888 
Protein GI115352049 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTA TTCCAGCCAA CGAAGACCCT GGCGTTTTGG AGAACGCGCT CTCGCATCTC 
CAATGTATTC TTGTTGCGCG CCGCACCCGC TATACGCCCG AGGCTGTCAG TTGGGCTCAG
TACGACATTC TTGAACTTCT GCGCCTGCAA GGCCCCATGA CACCTTCGCT GCTGGGCGAC
AAGCTGGGTT CAGCTCGTAC CGGCATATCC AAGTCTTTGC GTGTGCTCAA GGATCTCAAT
CTGGTGGAGC AAATGCAGGG AGACGGGGAT CGTCGCGAGC AGGTCACCAC GCTGACGCGG
CAAGGACGCG ATTTCCTCGT GCGTGCCGCC ACGGGCAGGC GTGACGCTGC ACAGTGCGTC
ATGGCGGCAC TGACGCCTGG TGAGCAGGCC ATGTTCACGG AGCTTTGCGA GAAAGCCAGC
GCTGCATTGA CCTCCCATGC CTCCGAACAG GGGACACGCG CATGA
 
Protein sequence
MTTIPANEDP GVLENALSHL QCILVARRTR YTPEAVSWAQ YDILELLRLQ GPMTPSLLGD 
KLGSARTGIS KSLRVLKDLN LVEQMQGDGD RREQVTTLTR QGRDFLVRAA TGRRDAAQCV
MAALTPGEQA MFTELCEKAS AALTSHASEQ GTRA