Gene Bamb_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1980 
Symbol 
ID4311746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp2177083 
End bp2177646 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content59% 
IMG OID638149797 
ProductTetR family transcriptional regulator 
Protein accessionYP_773870 
Protein GI115352031 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAG GCACACGCGA CGCCTTGATT CAGACTGCTG AGAACCTGAT GCGTACACGC 
GGCTACACCG CGTTCAGCTA CGCGGATCTG TCTGAGGCGG TAGGCATCCG GAAGGCAAGT 
ATCCACCATC ACTTTCCGAC CAAGGAAGAC TTGGGCGCGG CAATCGTTGA GGAGTACATC 
GACCGTGTTC GAACCGAATT CGGCCGGATC GAGATGCAGC ATGAGCATGT TATCGGCCGC 
CTCGAAGCCT TCCTCCAGAT CTTCAGGTCG AGCGCCGACG GCGGCCTGCT GCCGCTGTGC 
GGAGCACTCG CAGCCGAAAT GTCGGCACTG CCGCTGAGTC TGCAGCAGCT GACGCAACGC 
TTCTTCGACA TGCAGCTGAG TTGGCTCTCC AGAGCGCTTG AGCAAGGCAT CAAGCGGAAG 
GAGATTCCGG AAGGCAGCGG AGCCAAACAT AAGGCGTTCC TGCTGTTGAG CATTCTGGAG 
GGGTCCTGCT TTATCAACTG GGCTACCAGG GACGAAGATC CGCTGAGTCC GAGCGTTGTA 
CGGCTCATCG TAGAACACGC CTGA
 
Protein sequence
MAVGTRDALI QTAENLMRTR GYTAFSYADL SEAVGIRKAS IHHHFPTKED LGAAIVEEYI 
DRVRTEFGRI EMQHEHVIGR LEAFLQIFRS SADGGLLPLC GALAAEMSAL PLSLQQLTQR 
FFDMQLSWLS RALEQGIKRK EIPEGSGAKH KAFLLLSILE GSCFINWATR DEDPLSPSVV 
RLIVEHA