Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1959 |
Symbol | |
ID | 4310197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2156188 |
End bp | 2156958 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149776 |
Product | GntR family transcriptional regulator |
Protein accession | YP_773849 |
Protein GI | 115352010 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.622516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAC CCAACGTCGT GCCGCTGTCG GCGGCCCCGC TCTACGTGCA GATCAAGGAC ACGCTGCGCG CACGGATCCT CGACGGCACC TATGCGCCGC ACAGCCGGAT GCCGTCCGAG CACGAACTGT GCGCGATGTT CGACGTGAGC CGCATCACCG TGCGCCAGGC GCTCGGCGAC CTGCAGAAGG AAGGCCTGCT GTTCAAGTTG CACGGCAAGG GCACCTTCGT GTCGAAGCCG AAGGCGTTCC AGAATGTGAC GTCGCTGCAG GGCTTCGCCG AGGCGATGTC GTCGATGGGC TACGAGATCG TCAACCAGCT GCGCAGCGTT CGCACCGTGA AGGCCGACCG CCATCTCGCG ACGAAGCTGA ACGTGCCGGA AGGCGCGCCG CTCGTCGAGA TCCACCGCGT GCGGCTGCTC AACCGCGAGC CCGTGTCGCT CGAGCAGACG TGGGTGCCCG AGGCGCTCGG CAAGCGGCTC GCGGGCGCGG ATCTCGCGAC CCGCGACATC TTCCTGATCC TCGAGAACGA CTGCGGCGTG CCGCTCGGCC ACGCCGACGT GTCGATCGAC GCGATCCTCG CCGACGATGA AATCGTCGAT GCGCTGCGCG TCGAGGAAAG CAGCCCCGTG CTGCGTATCG AGCGCCTGAC GCACGACGCG TCGGGCACAC CGATCGACTA CGAACACCTG TACTTCCGCG GCGACGCCTT CCAGTACCGG TTGCGCATCG ATCGGCAGAA GGCGCTCCAA CCTGCAAGGA ACCCGCAATG A
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Protein sequence | MTQPNVVPLS AAPLYVQIKD TLRARILDGT YAPHSRMPSE HELCAMFDVS RITVRQALGD LQKEGLLFKL HGKGTFVSKP KAFQNVTSLQ GFAEAMSSMG YEIVNQLRSV RTVKADRHLA TKLNVPEGAP LVEIHRVRLL NREPVSLEQT WVPEALGKRL AGADLATRDI FLILENDCGV PLGHADVSID AILADDEIVD ALRVEESSPV LRIERLTHDA SGTPIDYEHL YFRGDAFQYR LRIDRQKALQ PARNPQ
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