| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1955 |
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| Symbol | ldcA |
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| ID | 4310193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2152334 |
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| End bp | 2153272 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149772 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_773845 |
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| Protein GI | 115352006 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCC AGCCCGCCGC GTCCTACACC ATCCGCCTGC TGGCGCCGTC CGGTTATCCG
CATGATCCCG ACGCGATCAA TCGCGCGCTC GAACGCCTGA GCGGCGCGCA GCAGCGCATC
GAGAACATCG AGGCGACGCA GCGCCGCTTT CAGCGTTTCG GCGGGACCGA CGGCGAGCGA
GCAGGCGACC TGAATCGCCT GGCGGATCCG GAGCGCGCGC TGCCGGACAT CGGGCTCGCG
GTGCGCGGCG GCTACGGCGC CGCCCGCATC CTGCACGGGC TCGACTATCG CGGGCTCGAG
CGCCGTTTGC GCGACCAGCC GATCGCGCTG GTGGGCCACA GCGACTTCAC CGCGATCCAG
CTCGCGCTGT ACGCGAAGGC GCGCATCAAG ACCTTCGGCG GCCCGATGCT GTCGGCCGAC
TTCGGCGCGG AAACACTGAG CGACTTCACG ATGCAACACT TCTGGCAGAC GCTGTCGCAG
CCGACCACGA CGATCATCGC CGAAGCGCCG CAGGTGCAGA CCGTGAACGT GACGGGCACG
CTGTGGGGCG GCAATCTCGC GATCCTGACG TCGCTCGTCG GCACGCCGTA CATGCCCGAT
ATCGAAGGCG GCATCCTGTT CATCGAGGAC GTCAACGAGC AGCCGTTCCG GATCGAACGG
ATGATCTATC AGCTGCATCT GTCGGGGCTG CTCGCGCGCC AGCAGGCGCT CGTGCTCGGG
CAGTTCACGG GCGCGCGGCC GTTCGACTAC GACAACGGCT ACGACATGCA GGCGATGATC
GACCAGGTGC GCTCGGTGAT CGGCATCCCG GTCGTCACGG GGCTGCAGTT CGGTCACGTG
CCCGACCTGC TGACGCTGCC GTTCGGCGCG CACGCGCAGC TCGTCGCGAA TGCGCACGGT
TTCCGGCTTA CGCTGTCGGA CTATCCGCAT CTCGGCTGA
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| Protein sequence | MSFQPAASYT IRLLAPSGYP HDPDAINRAL ERLSGAQQRI ENIEATQRRF QRFGGTDGER
AGDLNRLADP ERALPDIGLA VRGGYGAARI LHGLDYRGLE RRLRDQPIAL VGHSDFTAIQ
LALYAKARIK TFGGPMLSAD FGAETLSDFT MQHFWQTLSQ PTTTIIAEAP QVQTVNVTGT
LWGGNLAILT SLVGTPYMPD IEGGILFIED VNEQPFRIER MIYQLHLSGL LARQQALVLG
QFTGARPFDY DNGYDMQAMI DQVRSVIGIP VVTGLQFGHV PDLLTLPFGA HAQLVANAHG
FRLTLSDYPH LG
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