Gene Bamb_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1954 
Symbol 
ID4310192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp2151321 
End bp2152025 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID638149771 
ProductGntR family transcriptional regulator 
Protein accessionYP_773844 
Protein GI115352005 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTCA TGAACGAGCC CGATTCCCAT GCGTCCGGTA CAGCCGGCCC CGAAGCGATC 
GCCGAGCGGA TCCGCACCGC GATCCTCGAG CATCGGCTCG CGCCCGGCGC GAAGCTGACG 
GAGGCGCAGC TCTGCGACGT GTTCAGCGTG AAGCGCGGGA CGATCCGGCA GGCGCTCGCG 
CTGCTCGCGG CCGACAAGCT GGTCGATCTC GAGCCGAACC GCGGTGCGTT CGTCGCGAGT 
CCGACGCTGC AGGACGTGCA CGAGGTGTTC GAGATGCGCC GGATCATCGA GCTGGCCGTC 
GTCGAGCGGC TCGCGACGGG GCCGGGCGCA AAGCGGCTGA AGGGCGTCGC CGCGCTGATC 
GACAAGGAGC GCAAGGCGTT CGAGCGGCAC GATTTCGCGG CGTGGATCCG CCTGTCGGGC 
GAATTCCATA CGGCGCTCGC GGCGCTGACG GGCAATGCGA CGCTCTGCGA GTGCCTCGAC 
GGGCTCGTCG CACGCTCGAC GCTGATGTCG GCGCTGTACG AGTCGCACGG GCGCAGCCCG 
TGCTCGTGCG ACGACCACGA CGAGATCCTG AGCGCGCTGG AAGCAGGGGA TCCGAAGCGG 
GCGGTGACGC TGATGGCGCA CCACCTGCAG CATGTCGAAC TGAAGATGCT GGACCGGCCC 
GCACAAGGGC AGGTCGATTT GCGCGAAGTG TTCGGCGGCG CCTGA
 
Protein sequence
MQVMNEPDSH ASGTAGPEAI AERIRTAILE HRLAPGAKLT EAQLCDVFSV KRGTIRQALA 
LLAADKLVDL EPNRGAFVAS PTLQDVHEVF EMRRIIELAV VERLATGPGA KRLKGVAALI 
DKERKAFERH DFAAWIRLSG EFHTALAALT GNATLCECLD GLVARSTLMS ALYESHGRSP 
CSCDDHDEIL SALEAGDPKR AVTLMAHHLQ HVELKMLDRP AQGQVDLREV FGGA