Gene Bamb_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1950 
Symbol 
ID4310188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2147215 
End bp2147736 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID638149767 
Producthypothetical protein 
Protein accessionYP_773840 
Protein GI115352001 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCGA TGCGTTACAC GTTGGATCAA CTCAACACGA TGGCGCCGAG CGCATTCGTC 
GCGGCGCTGT CGGGGATCTT CGAACATTCG CCGTGGGTGG CCGAGGTCGC CGCGGCCGAG
CGGCCGTTCG CAAGCATCGA CGCGCTGCAC AAGACGATGT CGGATGCGGT CGAGACGGGC
GGCGAAGCGC GCCAGCTCGC CCTGATCAAC GCTCACCCGG AGCTGGCCGG CAAGGCCGCC
GTGCGCGGCG AGTTGACGGC CGAGTCGACG CGCGAGCAGA GCGGCGCGGG TCTCGATCAA
TGCACGCAGG AAGAGTTCGA CAAGCTGCTG ACGCTGAACC GCACGTATCG CGAGAAATTC
GGTTTCCCGT TCATCCTCGC GGTGCGCGGC TATGACCGGC ACGGCATCAT CGCGAACTTC
GAGTCGCGCG TGAATCATTC GCGCGCCGAG GAACTGCGCG CGAGCCTCGA CCAGATCTAC
CGGATCGCGC GCTTTCGCCT CGACGACCTG ATCGACGCCT GA
 
Protein sequence
MKAMRYTLDQ LNTMAPSAFV AALSGIFEHS PWVAEVAAAE RPFASIDALH KTMSDAVETG 
GEARQLALIN AHPELAGKAA VRGELTAEST REQSGAGLDQ CTQEEFDKLL TLNRTYREKF
GFPFILAVRG YDRHGIIANF ESRVNHSRAE ELRASLDQIY RIARFRLDDL IDA