| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1933 |
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| Symbol | |
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| ID | 4310171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2129947 |
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| End bp | 2131167 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149750 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_773823 |
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| Protein GI | 115351984 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0058469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTC TCGACGCGCC GGCGCCGTCC GCCGCCGACC AAGGCGACGC TTCGCTCGTC
AGCCTGCCCT GGATCAAGCA GCTGGTGTCG ATGGACACGA CGAGCCGCGT GCCGAACCTC
GGCCTGATCG AAGCGGTGCG CGACGCGCTG GCCGCGAAGG GCATCGTGTC GACGCTCACG
CACGATCCGC GCGAAGGCTG GGCCAACCTG TTCGCGACCG TGCCCGCGCA CGACGGCTCG
ACCGACGGCG GCATCGTGCT GTCGGGGCAC ACCGACGTCG TGCCGGTCGA CGGCCAGCAG
TGGGACAGCA ACCCGTTCGC GCCGGAAATC CGCGATGGCC GCCTGTACGG CCGCGGCACC
TGCGACATGA AGGGCTTCAT CGGCACGGCG CTCGCGCTGC TGCCCGAGAT GCAGGCGACG
AAGCTCGCGA AGCCGATTCA TTTCGCGCTG TCCTACGACG AGGAAATCGG CTGCGCGGGC
GCACCGCTGC TGATCGCCGA TCTCGTCAAG CGCGGCGTGA AGCCGTCCGG CTGCATCGTC
GGCGAGCCGA CCAGCATGCG GCCGATCATC GCGCACAAGG GCATCAACGC GTACCGCTGC
TGCGTGCGCG GTCACGCCGC GCACTCGTCG CTGACGCCGA AGGGCCTGAA CGCGATCGAA
TACGCGGCGC GCCTCATCTG CCACATCCGC GACATCGCCG AGCGCTTCCG TGCCGAAGGC
CCGTTCGACG AGCTGTACGA CGTACCGTTC ACGACCGCGC AGACGAGCAC GATCCAGGGC
GGCAACGCGA TCAACACGGT GCCGGCCGAA TGCCGGTTCG ACTTCGAGTT TCGCAACCTG
CCGACGCTCG ATCCCGAGCA GATCTTCACG CGCATCGAAG CGTATGCGCA GGAAACGCTG
CTGCCGCAGA TGCTGCGCGA ACATCCGAAC GCGGCGATCG AGTTCTCGAA GATCGCGGCG
GCACCCGGCC TCGACGCGAC GGAACAGGCC GCGATCACGC AGCTCGTGCG CGCGCTGACG
GCCGACCAGG ACAAGCGCAA GGTCGCATAC GGCACCGAGG CCGGCCTGTT CGAACGCGCG
GGCATCCCGA GCGTCGTATG CGGGCCCGGC AACATCGAGC AGGCGCACAA GCCGAACGAA
TATGTCGAGC TCGCGCAGCT CGCCGCCTGC GAGCAGTTCC TGCGCAAGTT CATCCGCAGC
ATGTCGGTCG ACGCACACTG A
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| Protein sequence | MSTLDAPAPS AADQGDASLV SLPWIKQLVS MDTTSRVPNL GLIEAVRDAL AAKGIVSTLT
HDPREGWANL FATVPAHDGS TDGGIVLSGH TDVVPVDGQQ WDSNPFAPEI RDGRLYGRGT
CDMKGFIGTA LALLPEMQAT KLAKPIHFAL SYDEEIGCAG APLLIADLVK RGVKPSGCIV
GEPTSMRPII AHKGINAYRC CVRGHAAHSS LTPKGLNAIE YAARLICHIR DIAERFRAEG
PFDELYDVPF TTAQTSTIQG GNAINTVPAE CRFDFEFRNL PTLDPEQIFT RIEAYAQETL
LPQMLREHPN AAIEFSKIAA APGLDATEQA AITQLVRALT ADQDKRKVAY GTEAGLFERA
GIPSVVCGPG NIEQAHKPNE YVELAQLAAC EQFLRKFIRS MSVDAH
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