| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1919 |
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| Symbol | |
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| ID | 4310923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2114673 |
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| End bp | 2115782 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149735 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_773809 |
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| Protein GI | 115351970 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCA CTGCCTTCTT CACCGACGAA CGCACCTTCT GGCACACCGG CGGCACGCAC
GCGCTGTTCT TCCCGGTCGG CGGCTGGGTC CAGCCGCCAT CGAGCGCCGG CTACGCGGAG
TCTCCCGATT CGAAGCGCCG CTTCCTGTCG CTCGTGCAGG CGTCGGGCCT TGCCGCTCAC
CTCGACATGC GCGGCGCCGC GCCGGCCACC GCCGACGATC TGCTGCGCAT CCATCCGGCC
AGCTATCTCG ACGCGTTCCG CGCGCTCAGC GATGCGCACG GCGGCGACCT CGGCGATCTC
GCGCCGTTCG GCAAGGGCAG CTACGAGATC GCCACGCTGT CCGCGGGCCT CGCGATCGCG
GCGATCGACA CCGTCGTCGC CGAGCATGCG GCCAGCGCAT TCTCGCTGTC GCGGCCGCCC
GGCCATCACT GCCTGCGCGA TCGCCCGATG GGCTTCTGCC TGCTCGCGAA CATTCCGATC
GCGATCGAGG CCGCGCGCGC GAAGCACGGC ATCGACCGCG TCGCGGTGAT CGACTGGGAC
GTGCATCACG GCAACGGCAC GCAGTCGATC TACTACGACG ATCCCAACAC GCTGACGATC
TCGCTGCATC AGGACCGCTG CTTTCCGCCC GGCTACAGCG GCGGCAGCGA CCGCGGCGAA
GGCGCGGGCG TCGGAGCGAA CCTGAACGTG CCGTTGCTGG CAGGCAGCGG AGATGACGCG
TATCGGTATG CGTTCGAGCG GATCGTGCTG CCGGCGCTCG AACGGTTCCG GCCGGAACTG
ATCGTCGTCG CGAGCGGCCT CGATGCGAGC GCGGTCGATC CGCTCGCGCG CATGCTGCTG
CATACCGACA GCTACCGGTT CATGACGCGG GCGGTGAAGG ACGCGGCACA GCGCCACTGC
GGCGGGCGGC TCGTGATCGT CCATGAAGGC GGGTATTCGG AGGCGTATGT GCCGTTCTGC
GGGCTCGCGA TCGTCGAGGA ACTGGCCGGC ATCCGTACCG AGGTCGCCGA TCCGATGCTC
GAGCTCGCGA TCGCGCAGCA GCCCGGCGAG CGGTTCGTCG CGTTCCAGCG CGAGCTGCTC
GACGAACTGG CGGCGTCGTT CGGCTTGTAA
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| Protein sequence | MNRTAFFTDE RTFWHTGGTH ALFFPVGGWV QPPSSAGYAE SPDSKRRFLS LVQASGLAAH
LDMRGAAPAT ADDLLRIHPA SYLDAFRALS DAHGGDLGDL APFGKGSYEI ATLSAGLAIA
AIDTVVAEHA ASAFSLSRPP GHHCLRDRPM GFCLLANIPI AIEAARAKHG IDRVAVIDWD
VHHGNGTQSI YYDDPNTLTI SLHQDRCFPP GYSGGSDRGE GAGVGANLNV PLLAGSGDDA
YRYAFERIVL PALERFRPEL IVVASGLDAS AVDPLARMLL HTDSYRFMTR AVKDAAQRHC
GGRLVIVHEG GYSEAYVPFC GLAIVEELAG IRTEVADPML ELAIAQQPGE RFVAFQRELL
DELAASFGL
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