| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1917 |
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| Symbol | |
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| ID | 4310921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2112370 |
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| End bp | 2113413 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149733 |
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| Product | porin |
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| Protein accession | YP_773807 |
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| Protein GI | 115351968 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCC GCTTCATCCG CACGGCCCCG GCCGCCGCGG CGCTCGCCGC ATGCAGCGTT
GCCGCGCATG CGCAGTCGAC CCTCACGCTG TACGGCGCGC TCGACGCCGG CGTGCAGTAC
CTGACGCATG CCGACGGACG ACACGCGGCC GTGCAGTTGC AGAACTACGG GATCCTGCCT
TCGCAGATCG GGCTGAAGGG CCACGAGGAT CTCGGCGGCG GCTGGCGCGC GCTGTTCAAG
CTCGAACAGG GCCTCAACCT CAACGACGGC ACCGCGACCG CCCCCGGCTA TGCGTTCTTC
CGCGGCGCGT ACGTGGGTGT CGCGGGCCCG GCCGGCACCG TCACGCTCGG GCGGCAATTC
AGCGTGCTGT TCGACAAGAC GCTGCTCTAC GACCCGCTGT GGTACGCGTC GTACAGCGGC
CAGGGCGTGA TCGTGCCGAT GACGGCGAAC TTCATCGACC ACTCGATCAA GTATCAGTCG
CCCACGTTCG CCGGCTTCGA TGTCGAGGCC CTCGCGGCGA CGGCCGGCGT CGCGGGCAAT
ACGCGCGCCG GGCGCGTGCT CGAACTCGGC GGCCAGTACA CGAGCAACGG GTTGTCGGTC
AGTGCGGTGC TGCATCAGGC GCACGGCGAC GCATCCGCCG CGGACGATGC TTCCGCGCGC
CGCCGCGACC TCGGCACGCT CGCCGCACGG TATGCATTCG CGTCACTGCC GCTCACCGTC
TATGCGGGCG TCGAACGCCT GAGCGGCGAT CTCGATGCGG CGCGCACGAT CGTCTGGGGC
GGCGCGCGCT ACCTGACCGC GAGCGGAGTC GGACTGAACG CGGGCTTCTA CCACACCGAT
TCGCGCACGC CGGCGATCGG CCACCCGACG CTGTTCATCG CGAGCACCAC CTACGCGCTG
TCGAAACGCA CCGTCGCCTA CGTGAACCTC GGCTATGCGC GCAATAGCGG CCAGAGCTCG
CAGACCGTCT ACGAATACGA CCCGACGCCG CTTGCCGGCG CATCGCAGTT CGGCGCGATG
GTCGGCATGT ACCACCTGTT CTGA
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| Protein sequence | MTLRFIRTAP AAAALAACSV AAHAQSTLTL YGALDAGVQY LTHADGRHAA VQLQNYGILP
SQIGLKGHED LGGGWRALFK LEQGLNLNDG TATAPGYAFF RGAYVGVAGP AGTVTLGRQF
SVLFDKTLLY DPLWYASYSG QGVIVPMTAN FIDHSIKYQS PTFAGFDVEA LAATAGVAGN
TRAGRVLELG GQYTSNGLSV SAVLHQAHGD ASAADDASAR RRDLGTLAAR YAFASLPLTV
YAGVERLSGD LDAARTIVWG GARYLTASGV GLNAGFYHTD SRTPAIGHPT LFIASTTYAL
SKRTVAYVNL GYARNSGQSS QTVYEYDPTP LAGASQFGAM VGMYHLF
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