| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1908 |
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| Symbol | |
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| ID | 4310912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2098664 |
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| End bp | 2100598 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149722 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_773798 |
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| Protein GI | 115351959 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.318888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATT TCTTCCGTAA TCACCAGCGC CTGATGATGG CGCTCCTGCT CCTTATCGTG
TTGCCGGGGC TGGGTTTCGT CGGGATCCAA GGTTTCCGCG GCTTCTTCGA CGACAGCGCG
AACGTCGCTG CGATCAACGG GCACAAGATC ACGCGGGTCG AATTCGACGG CGCGTTCCGT
CAGCAGATCG ACCAGGCGCG CCAGGCGCTC GGTGGGCAGT TCGACATCAA GGCATTCGAC
ACGCCGGAAC ATCGCAAGCA GGTCCTCGAC GGCCTGATCC AGCAACGCGT GCTGGCCGAT
GAGACGCAAC GCCTGCACCT GACCGCATCC GACAACGCCG TGCGCGACGC GCTGATGAGC
GACCCGATGA TCGCGTCGCT GAAGAAACCC GACGGTTCGA TCGACGTCGA GCGCTATGCC
CAGCTGCTGT CGTTCCAGGG AATGACGCCC GAGCAGTACC AGGAGCGCGT GCGCTACAGC
CTCGCGCTGC AGCAGATTCC GGCCAGCATC GTGGCGAGCG CATTCACGCC GAAGGGCCCG
GCGCAACGCC TGTCGGAGCT GGCCGCGCAG CAGCGCGAAG TGCAGGCGCT CGTGCAGAAG
ACGAGCGACT ACGCGGCGAA GGTGCAGCCG ACCGACGCGC AGCTCACCGC GTACTATGAC
GCGCACAAGC AGAGCTTCGC GACGCCGGAA ACCGCGACGA TCCAGTATCT CGTCTATTCG
CCGGCCGCGG CCGCCGCGAG CGCACAGCCG AACGATGCGG ACATCAAGAA GTTCTACGAC
GACAACCCGA CGCACTTCCG CTCGGAAGCG CAGGTACGCG TGAGCCACAT CTTCATCGCC
GCAGCGAGCG ACGCGAGCGC CGCCGACAAG GCAGCCGCGA AGGCGAAGGC CGAGCAGCTG
CTGGCCGACG TGAAGGCGCA TCCGGACCAG TTCGCGCAGA TCGCGCAGAA GAACTCGCAG
GATGCACCGT CGGCAGCGAA GGGCGGCGAT CTCGGCTTCA TCACGCGCGG CTCGACCGCG
GGTGGCAAGG CGTTCGACGA TGCCGCGTTC GCGCTGAAGC AGGGCGACGT CAGCGGTGTC
GTGCAGTCGG ATCTTGGCTT CCACATCCTG AAGGCGACGG AAGTGAAGCC GTCGGTGGTC
AAGCCGTTCG CCGACGTGAA GGATCAGATC GCGGTGCAGC TGAAGCAGCA GTATGCAGCG
AAGGCGTTCA CGGACAACGC GGAAGGCTTC ACGTCGACCG TGTATGAAAA GGCGAAGACG
CTGCAGCCGG CCGCCGACAA GTACAAGCTG ACGATCCAGA CGGCCACGGT CATGCCGACG
CCGAATCCGC AGCTGCCGCC GACGAGCCCG CTGAACAATC CGAAGTTCCT CGCTGCCGTG
TTCGCGAGCG ACTCGGTGAA GAGCCAGAAC AACACGCAGG CGATCGACGT GGGCAACAAC
ACGCTGATCT CGGCGCGCGT GACCGACTAC AAGCCGGCTG CCGTGCCGGC GCTCGACACG
ATCAAGGACG CGGTGCGTCA GAAGGTCGTC GCCGAGCAAG CCACGGAACT CGCGAAGAAG
GACGGCGCGG CGAAGCTGGC CGAGCTGCAG AAGTCGAAAT CGGCCGATGG CTTCACGCCC
GTCCAGAAGG TGTCGCGCAT GCAATCGCAA GGCCTGACGC CGGCCGCGCT GAGCGCCGTC
TACAAGGTCG ATGCGAAGAC GCTGCCGGCC TACGTCGGTG TCGATCTCGG TGCGGACGGC
TACGCGATCT ATCGCGTGAA CGCGGTGATC CCGGGCACGG CCGTCGATCC GCAGCAACTC
GCGGCCGCGC AGCAGCAGAT GGCGCAGGTC GAAGCGCAAA GCGAAGGCGA AGCGTATCTC
GCCGCGCTGC GCGACCGCTC GAAGGTGAAG CTGTACGGCA CCACGCCGAG CCAGTCGCAG
GACAGCGGCA ACTGA
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| Protein sequence | MLDFFRNHQR LMMALLLLIV LPGLGFVGIQ GFRGFFDDSA NVAAINGHKI TRVEFDGAFR
QQIDQARQAL GGQFDIKAFD TPEHRKQVLD GLIQQRVLAD ETQRLHLTAS DNAVRDALMS
DPMIASLKKP DGSIDVERYA QLLSFQGMTP EQYQERVRYS LALQQIPASI VASAFTPKGP
AQRLSELAAQ QREVQALVQK TSDYAAKVQP TDAQLTAYYD AHKQSFATPE TATIQYLVYS
PAAAAASAQP NDADIKKFYD DNPTHFRSEA QVRVSHIFIA AASDASAADK AAAKAKAEQL
LADVKAHPDQ FAQIAQKNSQ DAPSAAKGGD LGFITRGSTA GGKAFDDAAF ALKQGDVSGV
VQSDLGFHIL KATEVKPSVV KPFADVKDQI AVQLKQQYAA KAFTDNAEGF TSTVYEKAKT
LQPAADKYKL TIQTATVMPT PNPQLPPTSP LNNPKFLAAV FASDSVKSQN NTQAIDVGNN
TLISARVTDY KPAAVPALDT IKDAVRQKVV AEQATELAKK DGAAKLAELQ KSKSADGFTP
VQKVSRMQSQ GLTPAALSAV YKVDAKTLPA YVGVDLGADG YAIYRVNAVI PGTAVDPQQL
AAAQQQMAQV EAQSEGEAYL AALRDRSKVK LYGTTPSQSQ DSGN
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