Gene Bamb_1897 details

Gene Information

• Locus tag: Bamb_1897
• ID: 4311610
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2085095
• End bp: 2085526
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638149711
• Product: methionine-R-sulfoxide reductase
• Protein accession: YP_773787
• Protein GI: 115351948
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00357] methionine-R-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACACG ATACCGACGA TAAAACCTAC CCGTACCAGA AGGATGACGC CGAGCTGCGC 
CGCCGGCTCA CGCCGATGCA GTACGAGGTC ACGCAGCATG CGGCGACCGA GCGCGCGTTC 
ACCGGCGAAT ACACCGACAC CGAAGACGCC GGCATCTACA AATGCGTCGT CTGCAGCACG 
CCGCTGTTCG AATCCGGCGC GAAATTCCAT TCGGGCTGCG GCTGGCCCAG CTATTTCAAG 
CCGCTGAACG GCGAGGTGAT CGACGAGAAG ATCGACCGCA CGCACGGGAT GGTGCGCGTC 
GAGGTCCGCT GCAACCATTG CGGCGCGCAT CTCGGCCACG TGTTCGAGGA CGGCCCGCGC 
GACAAGACCG GTTTGCGGTA CTGCATCAAT TCGGCTGCGT TAAACTTCGA GTCCCGACCC 
GAAAACGAAT GA 

 

Protein sequence

MSHDTDDKTY PYQKDDAELR RRLTPMQYEV TQHAATERAF TGEYTDTEDA GIYKCVVCST 
PLFESGAKFH SGCGWPSYFK PLNGEVIDEK IDRTHGMVRV EVRCNHCGAH LGHVFEDGPR 
DKTGLRYCIN SAALNFESRP ENE