Gene Bamb_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1896 
Symbol 
ID4311609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2083488 
End bp2085056 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content69% 
IMG OID638149710 
Producthypothetical protein 
Protein accessionYP_773786 
Protein GI115351947 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTTT CCCGAAGCGC AGCCGATGCG GCTGACACTC TCCCCGACCT CGCCGCCACG 
CTCGGCGCGC CGGCCCTTGG CGCGTTCGTC ACGCTCGGCG ACGCGTTTCA TACGCGGCTG
CCGGCCGCGC CGCTGCCCGC GCCGTACGTC GTCGGCTGTT CCGACGAAGT CGCGCAGCTG
CTCGGCCTGC CGGCATCGTT CGCCACCCAG CCCGGCTTCG CCGAGCTGTT CGCCGGCAAC
CCGACGCGCG ACTGGCCCGC GCACGCACTG CCGTACGCGT CGGTGTATTC CGGTCACCAG
TTCGGCGTGT GGGCCGGCCA GCTCGGCGAC GGCCGCGCGC TGACGATCGG CGAACTCCCC
GGCACCGACG GCCGACGCTA CGAGCTGCAG ATCAAGGGCG GCGGCCGCAC GCCGTATTCG
CGGATGGGCG ACGGCCGCGC GGTGCTGCGT TCGTCGATCC GCGAATTCCT GTGTTCCGAA
GCGATGCATC ACCTCGGCAT CCCGACCACG CGCGCGCTCA CAGTGATCGG CTCCGACCAG
CCGGTGGTGC GCGAGGAGAT CGAGACGTCG GCCGTGGTCA CGCGCGTGTC GGAGAGCTTC
GTGCGCTTCG GCCACTTCGA GCACTTCTTC TCGAACGATC GCCCGGACCT GTTGCGCCAG
CTCGCCGATC ACGTGATCGA CCGCTTCTAT CCCGCGTGCC GCGAGGCCGA CGATCCGTAC
CTCGCGCTGC TCGAAGCCGC GACGCTGCGC ACGGCCGACC TCGTCGCGCA ATGGCAGGCC
GTCGGCTTCT GCCACGGCGT GATGAACACC GACAACATGT CGATCCTCGG CCTGACGATC
GACTACGGCC CGTTCGGCTT CGTCGACGCG TTCGACGCGA ATCACATCTG CAACCACTCC
GACACGAGCG GCCGCTACGC GTACCGGATG CAGCCGCGCA TCGCGCACTG GAACTGCTAC
TGCCTCGCGC AGGCGCTGCT GCCACTGATC GGGCTGCAGC ACGGCATCGC CGACGACGAT
GCGCGCGCCG AGCGCGCGGT CGACGACGCG CAGGCCGTGC TCGCGAAGTT TCCGGAGCGC
TTCGGCCCCG CGCTCGAACG CGCGATGCGT GCGAAGCTCG GCCTCGAGCT CGAACGCGAG
AACGACGCCG AACTTGCGAA CAAGCTGCTC GAAACGATGC ACGCGAGCCA TGCGGACTTC
ACGCTGACGT TCCGCCGCCT CGCGCAGCTG TCGAAGCACG ACGCGAGCCG CGACGCGCCG
GTGCGCGACC TGTTCATCGA TCGCGACGCG TTCGATGCGT GGGCGAACCT CTACCGCGAG
CGGCTGTCCG AGGAGACGCG CGACGACGCG GCCCGTGCGG CCGCGATGAA CCGCGTGAAC
CCGAAATACG TGCTGCGCAA TCATCTGGCC GAAGTCGCGA TCCGGCGCGC GAAGGAAAAG
GACTTTTCCG AAGTCGAGCG ACTCGCGCAG GTGCTGCGCC GGCCGTTCGA CGAACAACCG
GAACATGAAG CGTATGCGGC ATTGCCGCCC GACTGGGCCG GGTCGCTCGA AGTGAGCTGT
TCGTCGTGA
 
Protein sequence
MSFSRSAADA ADTLPDLAAT LGAPALGAFV TLGDAFHTRL PAAPLPAPYV VGCSDEVAQL 
LGLPASFATQ PGFAELFAGN PTRDWPAHAL PYASVYSGHQ FGVWAGQLGD GRALTIGELP
GTDGRRYELQ IKGGGRTPYS RMGDGRAVLR SSIREFLCSE AMHHLGIPTT RALTVIGSDQ
PVVREEIETS AVVTRVSESF VRFGHFEHFF SNDRPDLLRQ LADHVIDRFY PACREADDPY
LALLEAATLR TADLVAQWQA VGFCHGVMNT DNMSILGLTI DYGPFGFVDA FDANHICNHS
DTSGRYAYRM QPRIAHWNCY CLAQALLPLI GLQHGIADDD ARAERAVDDA QAVLAKFPER
FGPALERAMR AKLGLELERE NDAELANKLL ETMHASHADF TLTFRRLAQL SKHDASRDAP
VRDLFIDRDA FDAWANLYRE RLSEETRDDA ARAAAMNRVN PKYVLRNHLA EVAIRRAKEK
DFSEVERLAQ VLRRPFDEQP EHEAYAALPP DWAGSLEVSC SS