| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1892 |
|---|
| Symbol | |
|---|
| ID | 4311605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2077508 |
|---|
| End bp | 2078686 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638149706 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_773782 |
|---|
| Protein GI | 115351943 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.266832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG CCGTAATCGT ATCGACCGCA CGCACGCCGC TCGCGAAATC GTGGCGCGGC
GCATTCAACA TGACGCACGG CGCGACGCTC GGCGGCCACG TGGTCGCGGC CGCGCTCGAA
CGCGCGAAGC TCGACCCCGC GCGCATCGAG GACGTGATCA TGGGTTGCGC GAACCCCGAA
GGCGCGACCG GCGCCAACAT CGCGCGGCAG ATCGCGCTGC GCGCCGGGCT GCCGGTGAGC
GTGCCGGGGA TGACGGTGAA CCGTTTCTGC TCGTCCGGCC TGCAGACGAT CGCGCTCGCC
GCGCAGCGGA TCATCGCGGG CGAGGGCGAC GTGTACATCG CAGGCGGCGT CGAATCGATC
TCGTGCGTGC AGAACGAGAT GAACCGGCAC ATGGTCCAGG AAGGCTGGCT CGTCGAGCAC
AAGCCGGAGA TCTACTGGAA CATGCTGCAG ACGGCGGAGA ACGTCGCGAA GCGCTACGGG
ATTTCGAAGG AGCGGCAGGA CGCGTACGGC GTGCAGTCGC AACTGCGGGC CGCGGCCGCG
CAGGAAGCCG GGCGCTTCAA CGACGAGATC GTGCCGATCA CCGTACGCGC GGGCATTGCC
GACAAGGCGA CGGGCCGGCT GTTCACGCAG GACGTGACGG TGTCGGCCGA CGAAGGCATC
CGGCCCGACA CGACGCTCGA AGGCGTGTCG AAGATCCGTT CGGCCGTGCC GGGCGGCGTG
ATCACCGCGG GCAATGCGAG CCAGTTCTCG GACGGCGCGT CGGCATGCGT GGTGATGAAC
GCGGATGTCG CGCAGCGCGA AGGGCTGCGT CCGCTCGGCG TGTTCCGCGG TTTCGCGGTG
GCCGGTTGCG AGCCGGACGA GATGGGCATC GGGCCGGTGT TCGCGGTGCC GAAGCTGCTG
AAGCAGGCCG GGCTGAAGGT CGACGACATC GGCCTGTGGG AACTGAACGA AGCGTTCGCG
GTGCAGGTGC TGTACTGTCG CGATACGCTC GGGATTCCTG AGGACCGCCT GAACGTGAAC
GGGGGCGCGA TCGCGGTCGG CCATCCGTAC GGTGTGTCGG GTGCGCGCCT GACCGGTCAT
GCGCTGATCG AAGGCAAGCG GCGCGGCGTG AAATACGTGG TCGTCACGAT GTGCATCGGC
GGCGGGCAGG GGGCGGCCGG GCTGTTCGAA ATCGTTTGA
|
|---|
| Protein sequence | MTEAVIVSTA RTPLAKSWRG AFNMTHGATL GGHVVAAALE RAKLDPARIE DVIMGCANPE
GATGANIARQ IALRAGLPVS VPGMTVNRFC SSGLQTIALA AQRIIAGEGD VYIAGGVESI
SCVQNEMNRH MVQEGWLVEH KPEIYWNMLQ TAENVAKRYG ISKERQDAYG VQSQLRAAAA
QEAGRFNDEI VPITVRAGIA DKATGRLFTQ DVTVSADEGI RPDTTLEGVS KIRSAVPGGV
ITAGNASQFS DGASACVVMN ADVAQREGLR PLGVFRGFAV AGCEPDEMGI GPVFAVPKLL
KQAGLKVDDI GLWELNEAFA VQVLYCRDTL GIPEDRLNVN GGAIAVGHPY GVSGARLTGH
ALIEGKRRGV KYVVVTMCIG GGQGAAGLFE IV
|
|---|
| |