| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1891 |
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| Symbol | |
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| ID | 4311604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2075810 |
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| End bp | 2077210 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149705 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_773781 |
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| Protein GI | 115351942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.311116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACGA CCTATGCATC CGGGGAACCG CCGCGTGTCG TCAGCGCGGC CGCGAGGCTC
TACGCGAAAT GCCTGCTGGT CGGATTCGCG CTCTTGCCGG CCTATCTGAT TGCCTATTTG
TGGTTTTTCG GCGACCCCCA CGTCGTGTTC GAGAGCCACG CATTCCATGA AATCGCGATC
GCGGCCGCCA CACTCGAAGG CGCGTTCGTC ACCTACGTGA CGTGGGTGTG CTACCGGTCG
TCCGGCGAGC CGCTGCTGCG CTGGCTGACA CTCGGCTTTC TCGGCTTCGC GATGATCTAC
GCGCTGCACG GGGCGTTCAC CGGGATGGCG CACCACAATA TCTGGCTGTT CCTGCTGTAC
GGGCCCGCGT CGCGGCTCGT GATGTCGATC CTGCTGCTGA CGGGCATGCT GTCGTATTCG
AATCCGCCCG ACCGGCCGGA GAAGCGCACG CGTGCGCTAA CGTGGCTGCC GTGGATCGCG
TTCTTCCTGA TCATCAATGT CGCGGTCGCC TATATCGCGT ATTCGCCGGT CGCCGGCGCG
CTGGGCACGC GGCTGTCGAT GGAAGGCGGC GCGCTGATTT TTTCGCTGCT GAACGTTGGC
GTGCTGCTCG CCAGGCGGAT CCGTTCGCCG CTGATGGTGA TCTACGGGAT GTCGATCATG
GCGTTCGCGC TATCGTCGGT CGCGTTCATC CTCGGCAAGC CGTGGAATCA CATGTGGTGG
CTCGCGCATG CGATCTTCGC GGGCGGGTTC TTCCTGCTCA GCTATGGCGT CGTGCAGGCG
CTGCAGACGA CGCGCTCGTT CTCGGCGATC TACCGCCAGG AAGACCTGAT GAGCCGGCTG
TCGGAATCGA TGGCGCGCAC CGATAGCGCG CTGCAGGAGT TGCGGCGCAC GAACCAGAAG
CTCGAGTACA TGGCCGCGAC CGATCCGATG ACGGGTGCAT CGAACCGCCG CCAGTTCATC
GGGCAGGTCG AGCGCGAGAT CGTGCGTGCG GAACGCGACG GCACGCCGTT TTGCCTGCTG
GCGCTCGATC TCGACAACTT CAAGAACATC AACGACGCAT ACGGGCACCA GATCGGCGAC
GAGGTGCTGC GCGGCGTCGT GCGCCAGTGT CTCGAGGCGA TTCGTCCGGC GGGTGCGCTC
GCGCGGGTCG GCGGCGAGGA GTTCATGGCG CTGTTGCCCG AGATGCCGCT CGAAGGCGCG
CGCATGACGG CCGAGCGCGT GCGTTCGTCG ATCGCGAGTT CGCCGTTCGG GCTGGATTTC
AAGCGCGTGC AGGTGACGGT CAGCGTCGGC GTCGCGCAGT ACGGGGTCGA CGGGAGTACG
GTCGACGCGT TGCTGCGCGC GGTCGACGAA CGGCTGTACC AGGCGAAGCG CGACGGGCGC
AATCGCGTGG TCGCGCACTG A
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| Protein sequence | MSTTYASGEP PRVVSAAARL YAKCLLVGFA LLPAYLIAYL WFFGDPHVVF ESHAFHEIAI
AAATLEGAFV TYVTWVCYRS SGEPLLRWLT LGFLGFAMIY ALHGAFTGMA HHNIWLFLLY
GPASRLVMSI LLLTGMLSYS NPPDRPEKRT RALTWLPWIA FFLIINVAVA YIAYSPVAGA
LGTRLSMEGG ALIFSLLNVG VLLARRIRSP LMVIYGMSIM AFALSSVAFI LGKPWNHMWW
LAHAIFAGGF FLLSYGVVQA LQTTRSFSAI YRQEDLMSRL SESMARTDSA LQELRRTNQK
LEYMAATDPM TGASNRRQFI GQVEREIVRA ERDGTPFCLL ALDLDNFKNI NDAYGHQIGD
EVLRGVVRQC LEAIRPAGAL ARVGGEEFMA LLPEMPLEGA RMTAERVRSS IASSPFGLDF
KRVQVTVSVG VAQYGVDGST VDALLRAVDE RLYQAKRDGR NRVVAH
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