Gene Bamb_1890 details

Gene Information

• Locus tag: Bamb_1890
• ID: 4311603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2073523
• End bp: 2075664
• Gene Length: 2142 bp
• Protein Length: 713 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638149704
• Product: putative lipoprotein
• Protein accession: YP_773780
• Protein GI: 115351941

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.175823
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCGTT TCGCGAAGTC GCTGTGTATG GGATTCGTCT GCGCCGGCCT GCTCGCGGCC 
TGTAACGACG ACGACGTCAA GCCGGCCAAT CCGCCGTCGA ACCAGGCCGC CCTGTCGTTC 
CGCATGGACG CCGGCGGACA GATCAATGCG TTCTACCGGC AGGACCAGGT CGCCGCGCAT 
CTGCTGGTGC GTTCGTCGAC GAAACCGCGC CTGCTCGTGG TGTTTCCGGC CGGCAACAGC 
GGCACCGGGC TGTGGTTCGA CGATACCGCG CAGCCGGTGA ACTGGAGCCT CGACACGCCG 
CCCGCCGCGC TGTCGGCACC CGACACGCAC GGTCGTCCGC TGCACGGCAT CGGTGCCGAC 
GTGTCGGTCG ACACCGATAC GCTGACGATC CGCCAAGGCG TGCTCAGCAA CGTGCGCTTC 
CTGCGCGACT TCAACGGCGG TGCGACGATT CCGCCGGAGA TCGTCACCGC CCCGACGATC 
CAGGGCAGCG CCGCGCAATG GCAGCGCGAC CGGATCGACG GCGCCCCCGG CTACGCGCTG 
CGCATCACGC TGCGCGACGG CGGCAGCATC GCGCCGGCCG CGGGCGGCAA GCTCGTGCTG 
CGCGCGGCGC CCGGCTCCCG CACGCTGAAA CTGCACGTCG ACGCGCTGTC TGGCGAGACG 
CCGTTGTCGC CGATCACGCG CGCCGACCTG CTCGCGCCGT CCGTGAACCC CGACCCGGTC 
AGCCAGAACG TGCTCGAATT CCTGAGCTTC CACGACAAGC TGCTGGCCGG CTCGTGGCAG 
TACGACACCT ACTTCGGCCG CGACACGCTG ATCTCGGTGC GCATGCTGAT GCCGGTGCTG 
GCGCCGGCGG CGATCGAGGC CGGCCTGACG TCGGTGCTGA GCCGCCTGTC GAACGACGGC 
AAGGTCGCGC ACGAGGAAGG CATCGGCGAA TTCGCGCTGG TCGACAACGC GAAGAAGGGC 
CGGCCGAACG ATGCGACGCC GGCCTACGAC TACAAGATGA TCGACAGCGA CTACCTGCTC 
GCGCCGATCG CGGCGGCCTG GCTGATCGAC GACACGCGCG GCCAGGCGCG CGCGGCCGCC 
TATCTCGCGC AACGCGGCAG CGACGGCCAG ACCAACGGCA GCCGGCTCGT CGTCAACCTG 
CTGCACGTCG CGGCGACCGC GCAGCCATTC GCGCAGCAGC CGTCGGTCGC GAACCTGATT 
CGCCTGCGGC CCGGCGAGAT CGTCGGCAAC TGGCGCGACA GCACCGACGG GCTCGGCGGC 
GGCGTCTACC CGTATGACGT GAATGCCGTG CTCGTGCCGG CCGCGCTGCG CGCGGCGAAC 
GCGTTCCTCG CGCGCGGCTT GCTCGATCCG TACCTGGACG CCGGCCAACG CGCGGCGCTC 
GCGAACACGG CGACCGAAGC GGCCACCTGG GAGCAGCAGG CGCCGCCGCT GTTCCAGGTG 
AGCGTGCCGG CCGCGCAGGC GGCGACCGAC GTGTCGACCT ATGCGCCGTC CGCCGGCGTG 
CCGGCCGGCA CCGCGCCGAG CGCGCCGCTG TCGTTCTACG CGCTGTCGCT CGACCAGCAA 
GGCGCCCCGA TTCCGGTCAT GAATTCCGAC GGCGGCTTCG CGCTGCTGTT CGGCACGCCG 
CCGGACGACG AACTGCGGCG CATCGTCGCC GACGTGACGC GGCCCTTCCC GACCGGGCTC 
GTCACCGATG TCGGGATGCT GATCGCGAAC CCCGCGTATG CGAGCCAGAC GCTGTGGCCG 
AAGTTCACGA GTTCCGCGTA TCACGGCACG GTGATCTGGT CCTGGCAGCA GGCGATGTGG 
GTCGCCGGGC TCGATCGCCA GCTCGCGCGC CAGGACCTGT CGGACACGAC GCGCACGCTG 
CTGACGCAGG CACGGCAGAC GATCTGGCAG GTGATCTCGA ACGGGCGCGA CATGCGCACG 
TCGGAGATGT GGACCTGGTC GTACGTCAAC GGCCAGTACC GGCCAGACGC ATTCGGCACG 
CGCAGCGCGG ATGCGACCGA GGCCAACGCG GCGCAGCTGT GGAGCACGAC GTATCTCGCG 
ATCCGTGATC CGCAACTGCG CACGGGCAAG TACTGGTGGC AGGCATCACA GCGGTTGCAG 
GACGCGCAGC CGGCGAACAC GGCGGCGATT GCGTCGCGAT AG 

 

Protein sequence

MHRFAKSLCM GFVCAGLLAA CNDDDVKPAN PPSNQAALSF RMDAGGQINA FYRQDQVAAH 
LLVRSSTKPR LLVVFPAGNS GTGLWFDDTA QPVNWSLDTP PAALSAPDTH GRPLHGIGAD 
VSVDTDTLTI RQGVLSNVRF LRDFNGGATI PPEIVTAPTI QGSAAQWQRD RIDGAPGYAL 
RITLRDGGSI APAAGGKLVL RAAPGSRTLK LHVDALSGET PLSPITRADL LAPSVNPDPV 
SQNVLEFLSF HDKLLAGSWQ YDTYFGRDTL ISVRMLMPVL APAAIEAGLT SVLSRLSNDG 
KVAHEEGIGE FALVDNAKKG RPNDATPAYD YKMIDSDYLL APIAAAWLID DTRGQARAAA 
YLAQRGSDGQ TNGSRLVVNL LHVAATAQPF AQQPSVANLI RLRPGEIVGN WRDSTDGLGG 
GVYPYDVNAV LVPAALRAAN AFLARGLLDP YLDAGQRAAL ANTATEAATW EQQAPPLFQV 
SVPAAQAATD VSTYAPSAGV PAGTAPSAPL SFYALSLDQQ GAPIPVMNSD GGFALLFGTP 
PDDELRRIVA DVTRPFPTGL VTDVGMLIAN PAYASQTLWP KFTSSAYHGT VIWSWQQAMW 
VAGLDRQLAR QDLSDTTRTL LTQARQTIWQ VISNGRDMRT SEMWTWSYVN GQYRPDAFGT 
RSADATEANA AQLWSTTYLA IRDPQLRTGK YWWQASQRLQ DAQPANTAAI ASR