Gene Bamb_1877 details

Gene Information

• Locus tag: Bamb_1877
• ID: 4311590
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 2054958
• End bp: 2056946
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 638149691
• Product: phage terminase GpA
• Protein accession: YP_773767
• Protein GI: 115351928
• COG category: [R] General function prediction only
• COG ID: [COG5525] Bacteriophage tail assembly protein

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGA AAGCGACGGC GACGCCGGGC CGCTATAACC CGAACATCAC GCCGTGGGTG 
TTCGGCATGC ATGACGCGCT CGACGATCCG ACCGTGCAAA AGATCGTGTG CATGAAATCG 
GCGCAGGTCG CGTGGACGGA TGGTGTGCTG CTGAACTACA TCGGCAAGCG GATCGACGTC 
GATCCGTGTC CGATGATCGT CATGTTTGCG AAAGAGAAGT CGGCGAAGAA GTTCAATCTC 
GAGAAGTTCG AACCGATGGT CGAGGTGACG CCTCGCCTGT CGGCAAAATT GCCGGTGCAT 
GCTGCGCGCG ACAAGAACAA CCTGTGGGAT CACAAGACGT TCCCGCGCGG GTTCCTGAAG 
TTCATTACGT CGAACGCGCC GGACGATGTG AAGTCGACGC CGGCCCCGGT CGTCGCGGTC 
GAGGAGCCGG ACGATGCGAA CACGAACGTG CGCGATCAGG GCGATTCGAT CACGCTGCTG 
GAGGAACGCA ACAAGAGCTA TTCGGACAGC CGCCGCAAGG TAATTTTCGG TGGCACGCCC 
ACCGTTGACG GCTTCTCGCG CATCCAGCAA GCGTATCTGA CTTCGGATCA ACGCATCTAT 
CTGGTGCCGT GCCCCGATTG CGGCGAGGAG CATGAGCTGG CGTGGGAGAA CGTGACCTGG 
AGCGAGGACG CCGAAGTCGC ACATGAGGTG TTCGGCCGGG CACGGCCGGA CTCGGCACGC 
TATACGTGCC CGCACTGCGG CTCGTTGTGG GACGACTCGG CGCGTGTGTG TGCGGTCCGG 
CATGGGCGAT GGGTTGCGAC GGCGCCGTTT CACGGCGTCG CGGGCTTTCG TCTGAACGAG 
TTGGTATCGC CGTTCCCCGG CTCGCGCATG GCGGAGCTGG TCAAGAAGTG GCTGACGGCC 
GAGAAGGCGC TGCGCGAGGG CGACGACACG AAAATGCGTG CGTTCGTGAA CAACTCGCAG 
GGTCGGCCGT ACAAGTACAA GAGCGACCTG CCGGAGCTGG ACGTGCTGGC CGCGCGTGCG 
ATGCCGTACG CGGCATTCAT GGTGCCGGCC GGCGGTCTGT TGCTGACGCT CGGTGTCGAC 
GTGCAGCACG ACCGGCTCGC AATCATCCTG CGCGCGTGGG GACGTGGTGA GGAAAGCTGG 
CTCGTTGCGT GGGACGAGAT TCACGGCAAC GTGCTGCATC AGGAAGCCGA CCCGCTGTCG 
GGCGGCGTAT GGGGCGCGTT GACCGCGCTG GTGACGCACG GCTACCGGCA CGAAAGCGGC 
GGCGTATTGC GTGTTCGCGC GACATCGATC GATTCGTCGG ACGGCTCGAC ATCGGACGCG 
GTATACAAAT ATGTGCGTGC TGCGCAGCGG GTAGGGCTGA ACGTGCTGGC GATCAAGGGC 
AGCACCGAGG CCAACTCGGA GATTTTCAGC GTACCGAAGG CGTCGGTCGA TTCGACGCGC 
AACAACAGCA AGGCCGCGAA ATACGGCCTG CGCCCGTACA TGGTCGGGGT CAGCAAGGCG 
AAAGACCTGA TCCTCGACAA CCGGCTGAAG CTCGATGGCG ATGGGCCGGG GCGCATGCAC 
TGGTATGTGG GCGTGCGTTC CGACTATCTC GCGCAGGTGA CAGCCGAGGT CAAGGTGCCG 
GGCCGGATCG GCACCAAGCG TGTCTGGCAG AAGAAGGCCA GCGCCCGTAA CGAAGCGCTC 
GACTGCGAAG TCTATGCGCT GCACGCGGCA CGCAGCGCCA AAACCCACCT GATGACCGAA 
GCGCATTGGC GCGTCGAACA GGTGCGCATC TCGCAGGTTT CTCTGTTCGA TGCTGTTCCG 
ATATTGGAAT CGCTACCGTC TGCATTGCCG GTCGAGACAC TGCCGACCGT GCAGACGGAT 
GCCGATCCAC CGCCACCGAT CGAGCCGGTT CAGCCGGTCG CTAAACCACC CGAAACCCCG 
CCACCGAGCG GGGTTTCGCG CATTCAGGGC CGGCGTGTCG CTCGCTCGAC GTACCTGAAG 
CGCCGCTAG 

 

Protein sequence

MSAKATATPG RYNPNITPWV FGMHDALDDP TVQKIVCMKS AQVAWTDGVL LNYIGKRIDV 
DPCPMIVMFA KEKSAKKFNL EKFEPMVEVT PRLSAKLPVH AARDKNNLWD HKTFPRGFLK 
FITSNAPDDV KSTPAPVVAV EEPDDANTNV RDQGDSITLL EERNKSYSDS RRKVIFGGTP 
TVDGFSRIQQ AYLTSDQRIY LVPCPDCGEE HELAWENVTW SEDAEVAHEV FGRARPDSAR 
YTCPHCGSLW DDSARVCAVR HGRWVATAPF HGVAGFRLNE LVSPFPGSRM AELVKKWLTA 
EKALREGDDT KMRAFVNNSQ GRPYKYKSDL PELDVLAARA MPYAAFMVPA GGLLLTLGVD 
VQHDRLAIIL RAWGRGEESW LVAWDEIHGN VLHQEADPLS GGVWGALTAL VTHGYRHESG 
GVLRVRATSI DSSDGSTSDA VYKYVRAAQR VGLNVLAIKG STEANSEIFS VPKASVDSTR 
NNSKAAKYGL RPYMVGVSKA KDLILDNRLK LDGDGPGRMH WYVGVRSDYL AQVTAEVKVP 
GRIGTKRVWQ KKASARNEAL DCEVYALHAA RSAKTHLMTE AHWRVEQVRI SQVSLFDAVP 
ILESLPSALP VETLPTVQTD ADPPPPIEPV QPVAKPPETP PPSGVSRIQG RRVARSTYLK 
RR