| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1864 |
|---|
| Symbol | |
|---|
| ID | 4311577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2046354 |
|---|
| End bp | 2047250 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638149678 |
|---|
| Product | baseplate J family protein |
|---|
| Protein accession | YP_773754 |
|---|
| Protein GI | 115351915 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3948] Phage-related baseplate assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTGA TCGATCTGTC GGCACTCGAT CCGCCGGATC TCGTCGAGAC GCTCGATTTC
GAGGCCGCGT ATCAGTACAA GCTGCAGCAC TTCAAGAGCA TCTATCCTGA TTGGACAGCA
GCGCTCGAAT CCGATCCGGT CGTGAAATTG ATTGAGCTGG CGGCATACGA TGAAGTTCGG
TTTCGCGCGC GTGTGAACGA TGCAGGGCGT GCGGTGTTGC TGGCCTACTC GACAGGGGCG
GATCTCGAAC ACCTCGCGGT GCTCTGGAAT TTGCAGCGCG AGACGGTCGA CCCCGGCGAC
CCCGAGGCGC ATCCGCCAGT TCCTGCAACA CGTGAGCGCG ACGAGCGCTT GCGATTGCGT
ACACAGATGG GCATCGAGCG CTCGTCGACG GCAGGTCCGT TCGGCGCGTA CCGGTCCCTC
GCGATGGACG CATCGCCGGA TGTCGCGGAC GTGCGCGTCG ATCGGCCCGA GGCCGGTGTG
GTGCGCGTGG TCGTGAAGTC GTATTCGAAC GGTGGCGTGG CGAGCGCGGC ACTGCTCGAC
ACAGTGCGCC GCGCACTTTC GCCGGAAGAC CGTCGACCGC TGAACGACTC GCTGCTGGTG
GTCGCGGCTC GGCCCGTCAA TTACGCGATC GTCGCCGACG TGTACATCGG GCGCGGGCCG
GATCCGGGCG TCGTGCTTGC CGCGCGACGG CAGGATCTCG ATATCGCGGT GGCGGCAGGG
GAGGCGCTAC GCGTTGGCAT GCCGCGCTCG GCCGTGACCG GAGCGCTGCA TCCGAAAGCG
TCGGGTGTGG TGCGCGTCGA CCTGAAGTTA CCGGCAGCCG ACGTCGTGTG TGCGATTGAT
CAGTTCGCGC GCTGCACGTC GATCGTGCTC AATCCAAAGG TGGCCGATGA CGACTGA
|
|---|
| Protein sequence | MTVIDLSALD PPDLVETLDF EAAYQYKLQH FKSIYPDWTA ALESDPVVKL IELAAYDEVR
FRARVNDAGR AVLLAYSTGA DLEHLAVLWN LQRETVDPGD PEAHPPVPAT RERDERLRLR
TQMGIERSST AGPFGAYRSL AMDASPDVAD VRVDRPEAGV VRVVVKSYSN GGVASAALLD
TVRRALSPED RRPLNDSLLV VAARPVNYAI VADVYIGRGP DPGVVLAARR QDLDIAVAAG
EALRVGMPRS AVTGALHPKA SGVVRVDLKL PAADVVCAID QFARCTSIVL NPKVADDD
|
|---|
| |