| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1817 |
|---|
| Symbol | |
|---|
| ID | 4309864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2005441 |
|---|
| End bp | 2006334 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149631 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_773707 |
|---|
| Protein GI | 115351868 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TCGGATTCAT CGGCCTCGGC ATCATGGGCG CGCACATGGC GCGCAACCTG
CTCAAGGGCG ATCATCAGCT CGTCGTGAAC GGTGCGTTCC CGGTGCCGGA CGACCTGCGC
GCGAGCGCGA AGGTCGTCGC GAACTCGACC GAAGTCGCGC AGAACGCGGA CATCATCATC
TCGATGGTGC CGGATACGCC CGACGTGCGT AACGTGCTGT TCGCCGACGA CGGCGTCGCG
AAGGGCCTGA CGGCCGGCAA GCTCGTGATC GACATGAGTT CGATCTCGCC GCTCGACACG
CAGCAATTCG CGAAGCAGAT CAATACGCTC GGCTGCGACT ACCTCGACGC GCCGGTGTCC
GGCGGCGAAG TCGGCGCCCG CGAAGCGACG CTCACGATCA TGGTCGGCGG CCCGGAGCAG
GCCTTCGAGC GCGCGAAGCC GCTGTTCGAG AAAATGGGCA AGAACATCAC GCTCGTCGGC
GACAACGGCG CGGGCCAGAC CTGCAAGGTC GCGAACCAGA TCATCGTCGC GCTGAACATC
GAGGCGGTCG GCGAAGCGCT GCTGTTCGCC GCGCGCTCGG GGGCCGATCC GGAGCGCGTG
CGCCAGGCGC TGATGGGCGG CTTCGCCGCG TCGCGGATCC TCGAAGTGCA TGGCGCGCGC
ATGACGAAGC GCACGTTCGA TCCGGGCTTT CGCATCGAGC TGCATCAGAA GGACCTGAAC
CTCGCGCTCG ACGGCGCACG CAAGCTTGGC CTCGCGCTGC CGCACACGGC GAGCGCGCAG
CAACTGTTCA GCGTGTGCGC GTCGCACGGC GGCAAGGCAT GGGATCACTC GGCACTCGTG
CGTGCGCTCG AGATCATGTC GAACTTCGAA ATCGGCCAGA CGCCGGCCGC GTAA
|
|---|
| Protein sequence | MATIGFIGLG IMGAHMARNL LKGDHQLVVN GAFPVPDDLR ASAKVVANST EVAQNADIII
SMVPDTPDVR NVLFADDGVA KGLTAGKLVI DMSSISPLDT QQFAKQINTL GCDYLDAPVS
GGEVGAREAT LTIMVGGPEQ AFERAKPLFE KMGKNITLVG DNGAGQTCKV ANQIIVALNI
EAVGEALLFA ARSGADPERV RQALMGGFAA SRILEVHGAR MTKRTFDPGF RIELHQKDLN
LALDGARKLG LALPHTASAQ QLFSVCASHG GKAWDHSALV RALEIMSNFE IGQTPAA
|
|---|
| |