| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1812 |
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| Symbol | |
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| ID | 4309859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1999976 |
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| End bp | 2000881 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638149626 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_773702 |
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| Protein GI | 115351863 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.777601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTGTA ACGAAGCGCG AGCCTTGCTG GACGCGGACG TCGACCGCGA GCTGTCGGCG
CCCGATGCGT TGCGCGTCCA GCGGCATGTC GACGGGTGCG ACGCGTGCCG CCGCGAACGC
GAGCGGATCG TCGTGCTGGG GCGGGCCGTG CGGCAGGCCG ATTATCACCG CGCGCCCGAT
GCGCTGCGGG CGAGCCTCCT CGCGGCGCTG CCGGCGCCAG GCGGCGCGCG CGAGCGCGGG
CCGGCCGCGG CGGCGCCGGA GCCTGATGCG GCGCCGCGGC CTCGGCCTCG GCCTCGCTCA
AGCGGGCGCC GCTGGTTCTC CTGGCCGGCC GGACGCGGCG TATCGGCTCG CCCGGGTTCT
GCCGGCCCGG GGCCGCGTGT CACGGCGGTG CCCGGGCTCG GCTGGGGCGT GGCGCTGGTG
GTCGCGCTCG CCGCGGCGGC CGGGATGACG CTGTCCGCCC GTCACGCCGA AACCGGCCAG
ACGGTCGACG AGCTGGTCGC GAGCCACGTG CGGGCCGGCC TGTCGGCGCG CGACATCGAT
GTGATCTCGA CCGACCGGCA TACGGTCAAG CCGTGGTTCA ACGGCCGGCT CGACTATGCG
CCGCCGGTCG AGGACCTGTC GGCGAGCGGC TTCCCGCTCG TGGGTGGCCG GCTCGACTAC
GTCGGGCGGC GCCGCGTCGC GGTGCTCGTG TACCGATATC GGCAGCACGT GATCGACGTG
TACGTGCGGC CGGCGGGCGG CGGCGGAGAG GCGGGGCCGT ACGCGACCGT GTCGCAGGGC
TTTGCGCTCG ACCGGTGGGA CGCGGCCGGG ATGACCTGGT GGGCCGTGAC CGACGCCGAG
CCGTCGGCGC TGGCCGCCTT CAGGACGGCG CTCGACGCGC GGCTTGGCGG GGCGCGCAGC
GAGTGA
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| Protein sequence | MDCNEARALL DADVDRELSA PDALRVQRHV DGCDACRRER ERIVVLGRAV RQADYHRAPD
ALRASLLAAL PAPGGARERG PAAAAPEPDA APRPRPRPRS SGRRWFSWPA GRGVSARPGS
AGPGPRVTAV PGLGWGVALV VALAAAAGMT LSARHAETGQ TVDELVASHV RAGLSARDID
VISTDRHTVK PWFNGRLDYA PPVEDLSASG FPLVGGRLDY VGRRRVAVLV YRYRQHVIDV
YVRPAGGGGE AGPYATVSQG FALDRWDAAG MTWWAVTDAE PSALAAFRTA LDARLGGARS
E
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