| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1802 |
|---|
| Symbol | |
|---|
| ID | 4309849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1990914 |
|---|
| End bp | 1991375 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638149616 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_773692 |
|---|
| Protein GI | 115351853 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTCG AAGTTGACCG TCAAGTTCCC GATTTCACCG CACCGGCTAC GGGCGGCGAC
ATTTCGCTGT CCGGCCTGAA GGGCAAGAAG CTCGTCCTGT ATTTCTATCC GAAGGACAAC
ACGCCGGGCT GCACGACCGA AGGCCTGCAG TTCCGCGATC TCTATCCGAA GTTCAAGAAG
GCTGGCGCCG AAGTCATCGG CGTGTCGCGC GACAGCCTGC GCTCGCATGA CAATTTCAAG
GCAAAGCTCG AGCTGCCGTT CCCGCTGATC TCCGATGCCG ACGAAGCGCT GTGCGCGCTG
TTCGACGTCA TCAAGATGAA GAAAATGTAT GGCAAGGAAG TGCGCGGAAT CGAGCGCTCG
ACGTTCCTGA TCGACGCCGA CGGCGTGCTC CGCCAGGCAT GGCGCGGCAT CAAGGTGCCC
GGCCACGTGG ACGACGTGCT AAGTGCTGTA CAAGCGCTTT GA
|
|---|
| Protein sequence | MSVEVDRQVP DFTAPATGGD ISLSGLKGKK LVLYFYPKDN TPGCTTEGLQ FRDLYPKFKK
AGAEVIGVSR DSLRSHDNFK AKLELPFPLI SDADEALCAL FDVIKMKKMY GKEVRGIERS
TFLIDADGVL RQAWRGIKVP GHVDDVLSAV QAL
|
|---|
| |