Gene Bamb_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1791 
Symbol 
ID4311129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1978585 
End bp1980036 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID638149605 
Productthreonine synthase 
Protein accessionYP_773681 
Protein GI115351842 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.50005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACA TCTCCACGCG CGGCGCCGGC ATCGGCGAGC GCCATACGTT CTCCGACATC 
CTGCTCGGCG GTCTCGCGAA GGACGGCGGG CTGTACCTGC CGGCCGAGTA TCCGAAGGTG
TCGGCCGACG AACTCGCGCG CTGGCGCGCG CTGCCGTACG CGGATCTCGC ATTCGAGATC
CTGTCGAAGT TCTGCGACGA CGTGCCGGCC GACGACCTGC GCGCGATCAC GCGCCGCACG
TATACGGCCG CCGTGTACAG CAACACGCGC CATGGCGAGA ACGCGTCCGA CATCACGCCG
CTGAAGACGC TCGGCACCGA GAACGGCACC GCGCTGTCGC TGCTCGAACT GTCGAACGGC
CCGACGCTCG CGTTCAAGGA CATGGCGATG CAGCTGCTCG GCAACCTGTT CGAGTACACG
CTCGCGAAGC ACGGCGACGC GCTGAACATT CTCGGCGCGA CGTCGGGCGA CACGGGCAGC
GCGGCCGAAT ACGCGATGCG CGGCAAGGCC GGCGTGCGCG TGTTCATGCT GTCGCCGCAC
AAGAAGATGA GCGCGTTCCA GACGGCCCAG ATGTTCAGCC TGCAGGATCC GAACATCTTC
AACCTCGCGG TCGAAGGCGT GTTCGACGAC TGCCAGGACA TCGTGAAGGC CGTATCGAAC
GATCACGCGT TCAAGGCGCA GCAGAAGATC GGCACGGTCA ACTCGATCAA CTGGGCGCGC
GTCGTCGCGC AGGTCGTGTA CTACTTCAAG GGCTATTTCG CGGCGACGCA GTCCAATGAA
GAGCGCGTGT CGTTCACGGT GCCGTCGGGC AACTTCGGCA ATGTCTGCGC GGGCCACATC
GCGCGGATGA TGGGCCTGCC GATCGCGAAG CTCGTGGTCG CGACCAACGA GAACGACGTG
CTCGACGAGT TCTTCCGCAC CGGCGCCTAT CGCGTGCGCA GCGCGGAGAA CACGTATCAC
ACGAGCAGCC CGAGCATGGA CATCTCGAAG GCGTCGAACT TCGAACGCTT CGTGTTCGAC
CTGCTCGGCC GCGATCCGGC GCGCGTGATG CAGCTGTTCC GCGACGTCGA GGAGAAGGGC
GGTTTCGACC TCGCGGCGAG CGGCGATTTC GCGCGCGTGG CCGAGTTCGG CTTCGTGTCG
GGCCGCAGCA GCCACACCGA CCGCATCGCG ACGATCCGCG ACGTGTTCTC GCGCTACGAC
ACGATGATCG ATACGCACAC GGCCGACGGC GTGAAGGTCG CGCGCGAGCA TCTCGACGCG
GGCGTGCCGA TGGTCGTGCT CGAGACGGCC CAGCCGATCA AGTTCGGCGA GACGATCCGC
GAAGCGCTCG ATCGCGAAGC CGAGCGGCCG GCCGCATTCG ACGGGCTCGA GGCGCTGCCG
CAGCGTTTCG AGGTCGTGAA GGCCGACGCG CAACAGGTGA AGGACTTCAT CGCCGCGCAT
ACGGGCGCGT AA
 
Protein sequence
MNYISTRGAG IGERHTFSDI LLGGLAKDGG LYLPAEYPKV SADELARWRA LPYADLAFEI 
LSKFCDDVPA DDLRAITRRT YTAAVYSNTR HGENASDITP LKTLGTENGT ALSLLELSNG
PTLAFKDMAM QLLGNLFEYT LAKHGDALNI LGATSGDTGS AAEYAMRGKA GVRVFMLSPH
KKMSAFQTAQ MFSLQDPNIF NLAVEGVFDD CQDIVKAVSN DHAFKAQQKI GTVNSINWAR
VVAQVVYYFK GYFAATQSNE ERVSFTVPSG NFGNVCAGHI ARMMGLPIAK LVVATNENDV
LDEFFRTGAY RVRSAENTYH TSSPSMDISK ASNFERFVFD LLGRDPARVM QLFRDVEEKG
GFDLAASGDF ARVAEFGFVS GRSSHTDRIA TIRDVFSRYD TMIDTHTADG VKVAREHLDA
GVPMVVLETA QPIKFGETIR EALDREAERP AAFDGLEALP QRFEVVKADA QQVKDFIAAH
TGA