Gene Bamb_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1786 
Symbol 
ID4311124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1974905 
End bp1975423 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content69% 
IMG OID638149600 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_773676 
Protein GI115351837 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTCA CCGACTACAC CGACTACTCG CTGCGCGTCA TGCTGTATCT TGCCGTGCGT 
GGCGAGGGGC TCGCGACGAT CCAGGAGATC TCGGACGCCT ACGGCATCTC CAAGAACCAT
CTGATGAAGG TCGTCCAGCA GCTCGGCGAG CTCGGCTGGG TCGATACCGT CCGCGGCCGC
AACGGCGGGC TGCGACTGTT CCCCGACTCG CTGAAGCTGA CGGTCGGGCA GGTGGTGCGC
GCGACCGAGA ACGATTTCGC GCTGGTCGGC TGCTTTTCGG CCGACGGCGG CGAGTCGCGC
GGCTGCGTGA TCGAGCCGCA GTGCCGCCTG AAGGGCGTGC TGGCGGCCGC GCGCGATGCG
TTCTTCGCCG AACTCGACGG CCACACGCTC GGCGAACTGG CCGAACCCGC GTCGCCGCTC
GCCACTCTGC TGGGCATTCG CCCGATTGCG CTCGTGCGTG CCGAGCCGTC CGGGGATGAC
GCGCTGGCGT CCGTGGTGGC GCCGTCGAAG GCCGGCTGA
 
Protein sequence
MRLTDYTDYS LRVMLYLAVR GEGLATIQEI SDAYGISKNH LMKVVQQLGE LGWVDTVRGR 
NGGLRLFPDS LKLTVGQVVR ATENDFALVG CFSADGGESR GCVIEPQCRL KGVLAAARDA
FFAELDGHTL GELAEPASPL ATLLGIRPIA LVRAEPSGDD ALASVVAPSK AG