Gene Bamb_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1785 
Symbol 
ID4311123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1972162 
End bp1974759 
Gene Length2598 bp 
Protein Length865 aa 
Translation table11 
GC content66% 
IMG OID638149599 
ProductATPase 
Protein accessionYP_773675 
Protein GI115351836 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCG ACAAGCTCAC CACCAAGTTC CAGGAAGCAC TGGCAGACGC GCAAAGCCTC 
GCGGCAGGCC GCGACAATCA ATACATCGAA CCCGTTCACG TGCTGGCGGC GCTGGTCGCG
CAGCACGACG GCTCCGCCCG CTCGCTGATG TCGCGCGCGG GCGTTCACGT GCAGGCGCTG
CAAGGCGCGC TGAACGAGGC CATTTCGCGC CTGCCGCAAG TGACGGGCAC GGGCGGCGAC
ATCCAGATCG GCCGTGAGTT GGCCGGGCTG CTGAACCAGG CCGACAAGGA AGCGCAGAAG
CTCAACGACA CGTTCATCGC GAGCGAGATG TTCCTGCTCG CCGTGTCCGA CGACAAGGGC
GAAGCCGGCA AGCTCGCGCG CCAGCACGGC CTGTCGCGCA AGTCGCTCGA AGCCGCGATC
GCCGCGGTGC GCGGCGGCTC GCAGGTGCAC AGCCAGGATG CCGAAAGCCA GCGCGAGGCG
CTGAAGAAAT ACACGGTCGA CCTGACCGAG CGCGCCCGTG CGGGCAAGCT CGACCCGGTG
ATCGGCCGCG ACGACGAAAT CCGCCGCTCG ATCCAGATCC TGCAGCGCCG CACCAAGAAC
AACCCGGTGC TGATCGGCGA GCCGGGCGTG GGCAAGACCG CGATCGTCGA AGGGCTCGCG
CAGCGGATCG TCAACGGCGA AGTGCCCGAG ACGCTGAAGG GCAAGCGCGT GCTGTCGCTC
GACATGGCCG CGCTGCTCGC CGGCGCGAAG TATCGCGGCG AGTTCGAGGA GCGCCTGAAG
GCCGTGCTCA ACGACATCGC GAAGGACGAA GGCCAGACGA TCGTGTTCAT CGACGAGATC
CACACGATGG TCGGCGCCGG CAAGGCCGAA GGCGCGATGG ACGCGGGCAA CATGCTGAAG
CCGGCACTGT CGCGCGGCGA GCTGCACTGC ATCGGCGCGA CCACGCTCGA CGAATACCGC
AAGTACATCG AGAAGGACGC CGCGCTCGAG CGCCGCTTCC AGAAGGTGCT CGTCGACGAG
CCGAGCGTCG AGGCGACGAT CGCGATCCTG CGCGGGCTGC AGGAGAAGTA CGAACTGCAC
CACGGCGTCG ACATCACCGA CCCGGCGATC GTCGCCGCGG CCGAGCTGTC GCACCGCTAC
ATCACCGACC GTTTCCTGCC GGACAAGGCG ATCGACCTGA TCGACGAGGC TGCGTCGAAG
ATCAAGATGG AAATCGATTC GAAGCCCGAA GAGATGGACA AGCTCGACCG TCGTCTGATC
CAGCTGAAGA TCGAGCGCGA GGCCGTGAAG AAGGAGCAGG ACGAAGCGTC GCAGAAGCGC
CTGCAGCTGA TCGAGGAAGA GATCGATCGT CTCGGCCGCG AATATGCGGA CCTCGAAGAG
ATCTGGACCG CCGAGAAGGC CGCGGTGCAG GGCAGCGCGC AGCTCAAGGA AGAGATCGAG
AAGGTGCGCG CCGACATCGT GCGCCTGCAG CGTGAAGGCA AGCTGGAGAA GGTCGCCGAA
CTGCAGTACG GCAAGCTGCC GCAACTCGAG TCGCAGCTGA AGCAGGTCAC GCAGGCCGAA
GAGCAGGAGC AGCACAACCC GACGCGTCCG CGTCTGCTGC GCACGCAGGT CGGCGCGGAA
GAAATCGCGG AAGTCGTGTC GCGCGCAACC GGGATTCCGG TGTCGCGGAT GATGCAGGGC
GAACGCGAGA AGCTGCTGCA CATCGAGGAA AAGCTGCACG AGCGCGTGGT CGGCCAGGAC
GAGGCGATCA GCGCGGTCGC GGATGCGATC CGTCGTTCGC GCGCGGGTCT CGCCGATCCG
AACCGTCCGT ACGGCTCGTT CCTGTTCCTC GGCCCGACGG GTGTCGGCAA GACCGAGCTG
TGCAAGGCGC TGGCGTCGTT CCTGTTCGAT TCTGAAGAGC ACCTGATCCG CATCGACATG
AGCGAGTTCA TGGAGAAGCA CAGCGTCGCG CGGCTGATCG GCGCGCCGCC GGGCTATGTC
GGCTACGAGG AAGGCGGCTA CCTGACGGAA GCCGTGCGCC GCAAGCCGTA CAGCGTGATC
CTGCTCGACG AGATCGAGAA GGCGCATCCG GATGTGTTCA ACGTGCTGCT GCAGGTGCTC
GACGACGGTC GCATGACCGA CGGGCAGGGG CGTACGGTCG ACTTCAAGAA CACGGTGATC
GTGATGACGT CGAACCTCGG CTCGCAGGTG ATCCAGGCGA TGACGGGCGC GCCGCAGGAA
GAGATCAAGG ACGCCGTGTG GATCGAGGTG AAACAGCACT TCCGTCCGGA GTTCCTGAAC
CGGATCGACG ACGTCGTCGT GTTCCACGCG CTCGATCGCA GCAACATCGA ATCGATCGCG
AAGATCCAGC TCGCACGCCT GCACGACCGG CTCGCGAAGC TCGACATGGC GCTCGACGTG
TCGCCGGCGG CGCTCGAACA GATCGCGAAG GTCGGCTACG ACCCGGTGTT CGGTGCGCGG
CCGCTGAAGC GCGCGATTCA GCAGGAGATC GAGAACCCGG TCGCGAAGCT GATCCTCGCG
GGCCGCTTCG GCCCGAAGGA CGTGATCCCG GTCGACGTCC ACGACGGCGA GTTCATGTTC
GACCGCGTCG TGCACTGA
 
Protein sequence
MRIDKLTTKF QEALADAQSL AAGRDNQYIE PVHVLAALVA QHDGSARSLM SRAGVHVQAL 
QGALNEAISR LPQVTGTGGD IQIGRELAGL LNQADKEAQK LNDTFIASEM FLLAVSDDKG
EAGKLARQHG LSRKSLEAAI AAVRGGSQVH SQDAESQREA LKKYTVDLTE RARAGKLDPV
IGRDDEIRRS IQILQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE TLKGKRVLSL
DMAALLAGAK YRGEFEERLK AVLNDIAKDE GQTIVFIDEI HTMVGAGKAE GAMDAGNMLK
PALSRGELHC IGATTLDEYR KYIEKDAALE RRFQKVLVDE PSVEATIAIL RGLQEKYELH
HGVDITDPAI VAAAELSHRY ITDRFLPDKA IDLIDEAASK IKMEIDSKPE EMDKLDRRLI
QLKIEREAVK KEQDEASQKR LQLIEEEIDR LGREYADLEE IWTAEKAAVQ GSAQLKEEIE
KVRADIVRLQ REGKLEKVAE LQYGKLPQLE SQLKQVTQAE EQEQHNPTRP RLLRTQVGAE
EIAEVVSRAT GIPVSRMMQG EREKLLHIEE KLHERVVGQD EAISAVADAI RRSRAGLADP
NRPYGSFLFL GPTGVGKTEL CKALASFLFD SEEHLIRIDM SEFMEKHSVA RLIGAPPGYV
GYEEGGYLTE AVRRKPYSVI LLDEIEKAHP DVFNVLLQVL DDGRMTDGQG RTVDFKNTVI
VMTSNLGSQV IQAMTGAPQE EIKDAVWIEV KQHFRPEFLN RIDDVVVFHA LDRSNIESIA
KIQLARLHDR LAKLDMALDV SPAALEQIAK VGYDPVFGAR PLKRAIQQEI ENPVAKLILA
GRFGPKDVIP VDVHDGEFMF DRVVH