| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1777 |
|---|
| Symbol | |
|---|
| ID | 4311115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1965091 |
|---|
| End bp | 1966074 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638149591 |
|---|
| Product | pyruvate dehydrogenase (acetyl-transferring) |
|---|
| Protein accession | YP_773667 |
|---|
| Protein GI | 115351828 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.862776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTT CGACACAGCT CAGCAGGGAC AAGCTGCTGG ACGCCTACCG GCTGATGCGC
ACGATCCGCG AATTCGAGGA ACGTCTGCAC GTCGAGTTCG CGACCGGCGA AATCCCCGGC
TTCGTCCACC TCTATGCGGG CGAGGAGGCA TCCGCGGTCG GCACGATGCT GCACCTCGGT
CTCGAGGACT ACGTCGCGAC CACGCACCGC GGGCACGGCC ACTGCATCGC GAAAGGCGTC
GACGTGCACG GGATGATGGC CGAGATCTAC GGCAAGAAGA CGGGCGTCTG CCGCGGCAAG
GGCGGCTCGA TGCATATCGC CGACCTGTCG ATGGGGATGC TCGGCGCGAA CGGGATCGTC
GGCGCGGGCG GCCCGCTCGT GTGCGGCGCG GCGCTCGCGG CCAAGCACAA GAAGACCGGC
GGGGTCGGCG TGTGCTTCTT CGGCGACGGC GCGTCGAACC AGGGCGTGAT CTTCGAATCG
ATGAACCTCG CGTCGGTGTG GCGGCTGCCG GCGATCTTCG TGGCCGAAAA CAACGGCTAT
GCGGAGGCGA CGGCGTCGAG CTGGTCGGTC GCGACCGACA ACATCGCCGA TCGCGCGAAC
GGCTTCGGGA TGCCCGGCGT GATCGTCGAC GGCTTCGACT TCTTCGCGGT GCACGAGGCG
CTCGGCGAGG CGGTCGCACG CGCGCGCAGC GGCGGCGGCC CGACGCTCGT CGAGGTGAAG
TTCACGCGCT ACTTCGGCCA CTTCGAAGGC GATGCGCAGA CCTATCGCGC GCCGGGCGAA
GTGCAGAAGC TGCGCGACGA GAAGGACTGC CTGAAGCATT TCGAAACGCG CGTCGTGCGC
GCCGAAGCGC TGACGACCGA CGAGTTGCGT GCCGTCGATG CCCAGGTGAA GACGCTGATC
GACGATGCGG TCGCGCAGGC GAAGGCCGCG CCGCTGCCCG ATGCGGCCGA CCTGCTGGCC
GACGTGTACG TGTCGTACCC GTGA
|
|---|
| Protein sequence | MTVSTQLSRD KLLDAYRLMR TIREFEERLH VEFATGEIPG FVHLYAGEEA SAVGTMLHLG
LEDYVATTHR GHGHCIAKGV DVHGMMAEIY GKKTGVCRGK GGSMHIADLS MGMLGANGIV
GAGGPLVCGA ALAAKHKKTG GVGVCFFGDG ASNQGVIFES MNLASVWRLP AIFVAENNGY
AEATASSWSV ATDNIADRAN GFGMPGVIVD GFDFFAVHEA LGEAVARARS GGGPTLVEVK
FTRYFGHFEG DAQTYRAPGE VQKLRDEKDC LKHFETRVVR AEALTTDELR AVDAQVKTLI
DDAVAQAKAA PLPDAADLLA DVYVSYP
|
|---|
| |