| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1772 |
|---|
| Symbol | |
|---|
| ID | 4311110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1958799 |
|---|
| End bp | 1960556 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638149586 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_773662 |
|---|
| Protein GI | 115351823 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTG TCGTCCGTCT CACCGCCTCC GCCACGCGTG CGCTGCCGCG CTGGCTGCTG
CTTACGCTCT GCCTCGTCTA CGCGGCGTTC GGCCTGTTCG GCCGGGACCC GTGGAAGAAC
GAAGACGCGG CGGGCTTCGG CGTGATGTGG ACGATGGCCA CCGGCAGCTG GCACGACTGG
CTGCTGCCGA ATCTCGTCGG CAAGTTCATC ACTACCGACG GGCCGCTCGG CTACTGGCTC
GGCGCGCTGT CGATCCGCGC GCTGGCGCCG TGGGTCGACG CCAGCAACGC GTCGCGCGTC
GACACGGGCG TGCTGTTCTG CGTCGCATGC GCGTTCGTCT GGTACGCCGC CTACCTGCTC
GGCCGGCGCG CCGAGGTCCA GCCGTTCAAA TACGCATTCG GCGGCGAGCC GGAGCCGCGC
GACTACGGCC GCACGCTCGC CGACGGCGCG CTGCTGATCC TCGTCGCATG CTTCGGGCTC
GCGGAGCGCG GCCACGAAAC GACGCCGCAG CTCGCGCAGT TCGCGTGGAT CGCGATGCTC
GTGTACGGCA TCGTGCGCGG CATCGACAAG CCGATGCAGG GCGCGCTGTG GTGGGGCGTC
GCGATGGGCC TCGTCGGCCT GTCCGGCAAC CCGGTGCTCG TGGTCGCGCT GCTCGCCGGC
ACGGCCGCGC TGTGGCTCAT CACGCCGGAG ATGCGCAACC TGCGCCTGCC GCTGATCGGC
GTGCCGCTCG CGGCCGCGAT CTCCGCGCTG TGGCCGCTCG CCGCCTTCAA CGCGGCGCCC
GACGACGCCG CGTGGTTCTT CAACCAGTGG ATCCACGGCA GCCTGATGCG CTTCTCGGGC
CCGCCGACCG CGGTGCTCGG CTATGCGGCG AAGAACCTGC CGCTCTTCAC GTGGCCCGCG
TGGCCGCTCG CGATCTGGGC CTGGTGGAGC TGGGCCGGCA TGCGCCGCCG CGCGCACATC
GCGATTCCGC TGTCGGTCGT CGTGCCGCTC GTCGCGCTCG TGATCCTGCA GAGCCAGCAG
TCGAACCGCA TGTACATGCT GCTGCTGCCG CCGCTCGCGG TGCTCGCCAC CTTCGCGCTG
CCCACGCTCA AACGCGGCGC GATCAACGCG ATCGACTGGT TCGCGGTGCT GAGCTTCACG
ATCCTCGGCA CCTTCGTGTG GCTCGTATGG CTCGCGTCGC TCACCGGCTT CCCGCATCCG
CTCGCGCGCA ACCTCGCGCG CCTCGTGCCG GGCTACGAGC CGCACTTCAA GATCCTGTCG
TTCATCTGCG CGGTGATCGT CACCGTGTGC TGGTGCCTGC TCGCGCGCTG GCGCATCTCG
CGCCAGCCGA AGGTGCTGTG GCGCAGCGTC GTGCTGTCGA GCGCGGGCAC CACGCTGATG
TGGGTGCTGC TGATGACGCT GTGGCTGCCG ATCGTCAACT ACGGCCGGAC CTACAGCGAC
GTCGCGCAGC AGATCGCATC GCATCTGCCG AAAGACTACG AATGCATCTC GCCGGTGCGC
CTCGGTGATG CGCAGATTGC GACGTTCGCG TACTTCGGCG ACATGCACTT CGAATTCTCG
GGCGAGTGCG ACGTGATCCT GCGCCAGGAC CGCGCGGACT TCGGCGAGCC GAGCGCGATG
TCGCGATACG TGTGGCGTCT CGTGTGGGAA GGCCGCCGCG TGGCCGACCG CGACGAGCGC
TTCCGCCTGT ACGAGCGCAT CGAGCGGCCG ACGACGCCCG TCAAGCGCCG TGGCCCGCGC
CGCCGGACGG TCGATTGA
|
|---|
| Protein sequence | MKPVVRLTAS ATRALPRWLL LTLCLVYAAF GLFGRDPWKN EDAAGFGVMW TMATGSWHDW
LLPNLVGKFI TTDGPLGYWL GALSIRALAP WVDASNASRV DTGVLFCVAC AFVWYAAYLL
GRRAEVQPFK YAFGGEPEPR DYGRTLADGA LLILVACFGL AERGHETTPQ LAQFAWIAML
VYGIVRGIDK PMQGALWWGV AMGLVGLSGN PVLVVALLAG TAALWLITPE MRNLRLPLIG
VPLAAAISAL WPLAAFNAAP DDAAWFFNQW IHGSLMRFSG PPTAVLGYAA KNLPLFTWPA
WPLAIWAWWS WAGMRRRAHI AIPLSVVVPL VALVILQSQQ SNRMYMLLLP PLAVLATFAL
PTLKRGAINA IDWFAVLSFT ILGTFVWLVW LASLTGFPHP LARNLARLVP GYEPHFKILS
FICAVIVTVC WCLLARWRIS RQPKVLWRSV VLSSAGTTLM WVLLMTLWLP IVNYGRTYSD
VAQQIASHLP KDYECISPVR LGDAQIATFA YFGDMHFEFS GECDVILRQD RADFGEPSAM
SRYVWRLVWE GRRVADRDER FRLYERIERP TTPVKRRGPR RRTVD
|
|---|
| |