| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1770 |
|---|
| Symbol | |
|---|
| ID | 4311108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1957330 |
|---|
| End bp | 1958160 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149584 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_773660 |
|---|
| Protein GI | 115351821 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.693928 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCGA AACTGACCCG CTGGTTCGAC GACCGCCGCC GCGACCGCGC GCTGCGCAGC
CATCCGATTG CCGATGCGTT GTGGCAGGAC ACCGTGGCGC GCCTGCCGTT TCTCGACGCG
CTGCTGCCCA GCGACCTGGG CCGGTTGCGC GAACTCACGA GCCTGTTCAT CGCGAAGAAG
TCGTTTTCGA CCGCGCACGG GCTCGAGCTG ACCGACGAGA TGATCGTCGC GATCGCCGCG
CAGGCATGCC TGCCCGTGCT GAATCTGGAT TTGTCGCTGT ACGACGGCTG GGTCGGCGTC
GTCGTGTATC CGGGCGAATT CGTGATCCGC AAGACCGTGC AGGACGAGGA CGGCGTCGTG
CATGAAGTCG AGCAGGACGC GAGCGGCGAG GCGTGGGAAG GCGGCCCCGT GATCCTGTCG
TGGGAAGACG CGCAGATGAC GGACGGCCGC GACGCGTACA ACGTCGTGAT CCACGAGTTC
GCGCACAAGA TCGACATGGT CAACGGCGAG GCCGACGGCT ATCCGCCCCT TTTTCGCCGG
TGGCACGCGC CGCACCTCGA CGCGCAGGCC TGGGCCGACG TGTTCGAGCA TGCGTACGAC
CAGTTCTGCG CACGCGTCGA TGCGGTGCCG GACCGTGCGT GGGCGCGCTT CGAGCGGGAA
TCGCTGATCG ATCCGTATGC GGCCGACCAC CCGTCGGAAT TCTTCGCGGT GTGCAGCGAA
GCGCTGTTCG TGCGGCCACG CGCGTTCGAG TCCGAATTTC CGGAGCTGTA CCGGCTGCTG
GCGCGTTACT ACCGGCAGGA TCCGGCCCGC ACGGGCGCCC TCGGCGCGTG A
|
|---|
| Protein sequence | MLSKLTRWFD DRRRDRALRS HPIADALWQD TVARLPFLDA LLPSDLGRLR ELTSLFIAKK
SFSTAHGLEL TDEMIVAIAA QACLPVLNLD LSLYDGWVGV VVYPGEFVIR KTVQDEDGVV
HEVEQDASGE AWEGGPVILS WEDAQMTDGR DAYNVVIHEF AHKIDMVNGE ADGYPPLFRR
WHAPHLDAQA WADVFEHAYD QFCARVDAVP DRAWARFERE SLIDPYAADH PSEFFAVCSE
ALFVRPRAFE SEFPELYRLL ARYYRQDPAR TGALGA
|
|---|
| |