Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1762 |
Symbol | |
ID | 4311100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1947910 |
End bp | 1949115 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638149576 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_773652 |
Protein GI | 115351813 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.176134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA GTCAGGGCCC GCTCGCGGGC GTCAAAGTGC TCGAATTCGG GACGCTGATC GCGGGGCCGT TCGCGTCGCG CCTCTTGGCC GAATTCGGCG CGGAAGTGAT CAAGATCGAG GATCCGAACG GCGGCGACCC GCTGCGCAAG TGGCGCAAGC TGCATCCGGA GCAGGGCGGC ACGTCGCTGT GGTGGTCGGT CCAGGCGCGC AACAAGAAAT CGGTCACCCT CAACCTGAAA TCCGATGCCG GCAAGGCGAT CGCGCGGCAG CTCGCGCGCG AGGCCGACAT CGTGGTCGAA AACTTTCGCC CGGGCCTGCT CGAGAAGCTC GGCCTCGGCT ACGACATCCT GTCGGCCGAC AACCCCGGTC TCGTGATGGT GCGCCTGTCC GGCTACGGGC AGACGGGCCC GTACCGCGAC CGGCCCGGCT TCGGCGCGAT CGCCGAATCG ATGGGCGGAT TGCGTCACAT CACCGGCTAT CCGGAGTTGC CGCCGCCGCG CATCGGCATC TCGATCGGCG ACTCGATCGC CGCGCTGCAC GGCGTGATCG GCGCGCTGAT GGCGCTCCAC CACCGCAACG TGAATGGCGG CGCGGGGCAG GTGGTCGACG TTGCGCTGTA TGAAGCGGTA TTCAACATGA TGGAAAGCGT GGTGCCCGAA TACGGCGTGT ACGGGATGGT GCGCGAGCGC ACCGGCGCGT CGCTGCCGGG CATCGTGCCG TCGAACACCT ACGCGTGTCG CGACGGCAGC ATCGTGATCG GCGGCAACAG CGACCCGATC TTCAAGCGGC TGATGAAGGC GATCGAGCGC GACGACCTCG CGGACGATCC CGCACTCGCA CGCAACGACG GACGCGTGCC GCGCACGCAG GAAATCGACG ACGCGATCGC CGCGTGGCTC GCGCCGCGCA CGATCGACGA CGCGCTGGCC GTGCTCAACG CGGCCGACGT GCCGGCCGGG CGCATCTACA GCGCCGCCGA CATGTTCACC GATCCCCAGT TCGTCGCGCG ACAGATGATC CAGCGTTTCA AGCTCGCCGA CGGCACCGAC ATTCCGCTGC CGAACGTCAC GCCGAAGCTG TCCGGCACGC CGGGCGAAAC GCGCTGGCTC GGGCCCGAAC TCGGCGAGCA CACGGAAGAG GTGCTGCGCG GCCTCGGCTA CGACGCGCAG GCGATCGCCG CGCTGCGCGA GGCCGGCGCG ATCTGA
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Protein sequence | MSTSQGPLAG VKVLEFGTLI AGPFASRLLA EFGAEVIKIE DPNGGDPLRK WRKLHPEQGG TSLWWSVQAR NKKSVTLNLK SDAGKAIARQ LAREADIVVE NFRPGLLEKL GLGYDILSAD NPGLVMVRLS GYGQTGPYRD RPGFGAIAES MGGLRHITGY PELPPPRIGI SIGDSIAALH GVIGALMALH HRNVNGGAGQ VVDVALYEAV FNMMESVVPE YGVYGMVRER TGASLPGIVP SNTYACRDGS IVIGGNSDPI FKRLMKAIER DDLADDPALA RNDGRVPRTQ EIDDAIAAWL APRTIDDALA VLNAADVPAG RIYSAADMFT DPQFVARQMI QRFKLADGTD IPLPNVTPKL SGTPGETRWL GPELGEHTEE VLRGLGYDAQ AIAALREAGA I
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