Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1758 |
Symbol | |
ID | 4311096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1944018 |
End bp | 1945103 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638149572 |
Product | RNA polymerase sigma factor RpoS |
Protein accession | YP_773648 |
Protein GI | 115351809 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.6562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAT CGAAGCGCCA CGAGCCGCAA GCCGAGTCTG AGAAGATCAG TCGTGCCACG CAAGCATCGG TGGGGCGAGC TGGCGCTTCG AAGGACGACG AAGACGACGT CGCGGAAAAC GAACGTGATC TCGAGGCAAG CGACGCCGAA GCGGACGGCG ACGGCGAGCG CGAAGGCCGT GCGGAAGCAG CGCCCGACGT CGACGATTTC CGCGCATTGC TGCAGGCCGA GCTCACGGCC GACACGATCC AGCATTACCT GAACCGCATC AGCGTGAAGC CGCTCCTGAC CGTCGAGGAG GAGCAGCGCT ATTCGCGTCT CGCGAAGGCC GGCGAATTCG AGGCGCGGCA GGTGATGATC GAGCGCAACC TGCGCCTCGT CGTCAGTATC GCGAAGGGTT ACCTGAACCG CGGCGTGCCG CTGCTCGACC TGATCGAGGA AGGCAACCTC GGCCTGATGC ACGCGATCGA GAAATTCGAC CCGACGCGCG GCTTTCGCTT CTCGACCTAT GCGACGTGGT GGATCCGCCA GAGCATCGAG CGGGCGATCA TGAACCAGGC GCGCACCGTG CGCCTGCCCG TGCACGTGAT CCGCGAGCTG AACCAGGTGC TGCGCGCGAA GCGCCACCTC GAAAAGAATT CGATGTCGAC GGGCGAGGCG GCCGAGCGCC GCGAAGCCAG CATCGACGAC ATCGCCTATC TCACCGGCAA GACCGCCGAG GAAGTCACCG ACATCCTCGC GCTCAACGAG CACACCGCAT CGCTCGACGC ACCGCTCGAC CTCGATCCCG CGAGCAGCCT GCTCGATCTG CTGCCCGACG ACCAGAGCCA GTCGCCCGAC GCCGAGGTGC AGCACCGCGA GCTCGAGACG CTCACGCGCG CGTGGCTGTC ACGTCTGTCC GACAAGCACC GCCACGTGAT CGAGCGCCGC TTCGGCCTGA ACCACATCGA ACCGGCCACG CTCGAGGAGC TGGCGGACGA GATGGGGCTC ACGCGCGAGC GCGTGCGGCA GATCCAGCAG GAAGCGCTGG TGCGCCTCAA GCGGTTCTTT GCCTCCAATG GCGTTCGCAA GGACGCCGTT CTGTAA
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Protein sequence | MPKSKRHEPQ AESEKISRAT QASVGRAGAS KDDEDDVAEN ERDLEASDAE ADGDGEREGR AEAAPDVDDF RALLQAELTA DTIQHYLNRI SVKPLLTVEE EQRYSRLAKA GEFEARQVMI ERNLRLVVSI AKGYLNRGVP LLDLIEEGNL GLMHAIEKFD PTRGFRFSTY ATWWIRQSIE RAIMNQARTV RLPVHVIREL NQVLRAKRHL EKNSMSTGEA AERREASIDD IAYLTGKTAE EVTDILALNE HTASLDAPLD LDPASSLLDL LPDDQSQSPD AEVQHRELET LTRAWLSRLS DKHRHVIERR FGLNHIEPAT LEELADEMGL TRERVRQIQQ EALVRLKRFF ASNGVRKDAV L
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