| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1750 |
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| Symbol | ispG |
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| ID | 4309832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1935508 |
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| End bp | 1936824 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149564 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_773640 |
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| Protein GI | 115351801 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTAT CGATGCAATC CGAAGCTCAA TCCCCACGCA GCAGTCAGAT TTGTTCAACC
GAGCCGGTGT TCGGCGGGCA TCAGCCGCGT CGCGTGTCGC ATGCGGTGGA TGTTCGTTGG
GGCGGGCAGC TCGTGACGAT CGGCGGCGAT GCGCCGGTGC GCGTCCAGTC GATGACGAAT
ACCGACACGG CCGATGCGAT CGGCACGGCG ATCCAGATCA AGGAACTCGC GAACGCGGGC
TCCGAACTGG TCCGCATCAC CGTGAACACG CCGGAGGCCG CGGCCGCCGT GCCGGCGATC
CGCGAGCAGC TCGACCGGAT GGGCGTGACC GTGCCGCTCG TCGGCGATTT TCACTACAAC
GGCCACCTGC TGCTGCGCGA CTACCCGGGC TGCGCGGAGG CGCTGTCGAA GTACCGGATC
AATCCCGGCA ACGTCGGCCA GGGTGCGAAG CGCGACACGC AGTTCGCGCT GATGATCGAA
GCCGCGGCCA AGTACGACAA GGCGGTGCGG ATCGGCGTGA ACTGGGGCAG CCTCGACCAG
GACCTGCTCG CGCGCATGAT GGACGAGAAC GGCGCGCGTG CGCAGCCGTG GGGCGCGCAA
AGCGTGATGT ACGAGGCGCT GATCCAGTCG GCGATCGGCT CGGCCGAGCG TGCGGTCGAA
CTCGGTCTCG GCCGTGATCG CATCGTGCTG TCGTGCAAGG TCAGCGGCGT GCAGGACCTG
ATCGCCGTGT ACCGCGAACT CGGCCGCCGC TGCGGCTTCG CGCTGCACCT CGGTCTGACC
GAGGCCGGCA TGGGCTCGAA GGGCATCGTC GCGTCGACGG CCGCGCTCGG CGTGCTGCTG
CAGGAAGGGA TCGGCGACAC GATCCGCATC TCGCTGACGC CGGAGCCGGG CGCGCCGCGC
ACGGGCGAGG TGATCGTCGG CCAGGAAATC CTGCAGACGA TGGGCCTGCG CTCGTTCGCG
CCGATGGTGA TCGCGTGCCC GGGCTGCGGC CGCACGACGA GCACGCTGTT CCAGGAGCTC
GCGATGCAGA TCCAGACCTA CCTGCGCGAG CAGATGCCCG TATGGCGCAA GGAGTATCCG
GGCGTCGAGA AGATGAACGT CGCGGTGATG GGCTGCATCG TCAACGGCCC GGGCGAATCG
AAGCACGCGA ACATCGGCAT CAGCCTGCCG GGTTCGGGCG AGAACCCGGC CGCGCCCGTC
TTCATCGACG GCGAGAAGGT CAAGACGCTG CGCGGCGAGC GGATCGCCGA GGAATTCCAG
CAGATCGTCA GCGACTACGT CGCACGCAAC TACGGCCGCA CCGAGGCCCT GAATTAA
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| Protein sequence | MDLSMQSEAQ SPRSSQICST EPVFGGHQPR RVSHAVDVRW GGQLVTIGGD APVRVQSMTN
TDTADAIGTA IQIKELANAG SELVRITVNT PEAAAAVPAI REQLDRMGVT VPLVGDFHYN
GHLLLRDYPG CAEALSKYRI NPGNVGQGAK RDTQFALMIE AAAKYDKAVR IGVNWGSLDQ
DLLARMMDEN GARAQPWGAQ SVMYEALIQS AIGSAERAVE LGLGRDRIVL SCKVSGVQDL
IAVYRELGRR CGFALHLGLT EAGMGSKGIV ASTAALGVLL QEGIGDTIRI SLTPEPGAPR
TGEVIVGQEI LQTMGLRSFA PMVIACPGCG RTTSTLFQEL AMQIQTYLRE QMPVWRKEYP
GVEKMNVAVM GCIVNGPGES KHANIGISLP GSGENPAAPV FIDGEKVKTL RGERIAEEFQ
QIVSDYVARN YGRTEALN
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