| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1736 |
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| Symbol | |
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| ID | 4309818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1918548 |
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| End bp | 1920872 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149550 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_773626 |
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| Protein GI | 115351787 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.605663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAA CCGTAGCACT CAAGATCGTA CAGCGCATCG CCACCGAACT GTCCGTCCAG
CCGCGCCAGG TCGCGGCGGC CGTGCAACTC CTCGACGAAG GCTCGACCGT TCCGTTCATT
GCCCGGTACC GCAAGGAAGT GACGGGCAAC CTGGACGACA CGCAGCTGCG CCAGCTCGAG
GAGCGCCTCC TGTATCTGCG CGAACTCGAG GATCGCCGCG CGACGATCCT GTCGAGCATC
GACGAACAGG GCAAGCTGAC CGACGAACTG CGCGCCGCGA TCGACGCGGC CGACAGCAAG
CAGGTGCTCG AAGACCTTTA TCTGCCGTAC AAGCCGAAGC GCCGCACGCG CGCGCAGATC
GCCCGCGAAG CCGGCCTCGA GCCGCTCGCG CAGGCGCTGC TCGCGAATCC GCTGCTCGAC
CCGCAGGCCG AAGCCGCCGC GTACGTCGAT GCCGACAAGG GTGTCGCCGA CGTGAAGGCC
GCGCTCGACG GCGCGCGCGA CATCCTGTCC GAACAGTTCG GCGAAACGGC CGAGCTGCTC
GGCAAGCTGC GCGACTATCT GCACAGCCAG GGCGTCGTGT CGTCGGCCGT GGTCGAAGGC
AAGGAAAACG AGGAAGGCGA GAAATTCCGC GACTACTACG ACTACGCTGA GACGATCCGG
ACCGTGCCGT CGCACCGCGC GCTCGCGCTG TTCCGCGGCC GCAACGCCGG TGTGCTGACC
GTCAAGCTGG GCCTCGGCGA GGAGCTCGAC GCGCAGGTTC CGCATCCCGG CGAAGCGATG
ATCGCGCGCC ATTTCGGGAT CGCGAACCAG AACCGTCCCG CCGACAAGTG GCTGTCCGAC
GTGTGCCGCT GGTGCTGGCG CGTGAAGGTG CAGCCGCACA TCGAGAACGA ACTGCTCACG
CAACTGCGTG AAACGGCGGA AGCCGAGGCG ATCCGCGTGT TCGCGCGCAA CCTGAAGGAC
CTGCTGCTGG CCGCGCCGGC CGGCCCGAAG GCCGTGATCG GTCTCGACCC CGGCCTGCGC
ACGGGCGTGA AGGTCGCCGT GGTCGACCGC ACCGGCAAGC TGCTCGCGAC CGACACGATC
TACCCGCACG AGCCGCGCCG CGACTGGGAC GGCTCGCTCG CGAAGCTCGC GCGCATCGCC
GCGCAGACGC AGGCCGAGCT GATCAGCATC GGCAACGGCA CCGCGTCCCG TGAAACCGAC
AAGCTCGCGA GCGAGCTGAT CTCGAAGCAC CCCGAACTGC GGCTGCAGAA GATCGTCGTG
TCGGAAGCCG GCGCGTCGGT CTACTCGGCG TCCGAGCTGG CCGCGAAGGA ATTCCCGGAA
CTCGACGTGT CGCTGCGCGG CGCCGTGTCG ATCGCGCGCC GTCTGCAGGA TCCGCTCGCC
GAGCTCGTGA AGATCGAGCC GAAGGCGATC GGCGTCGGCC AGTACCAGCA CGACGTGAAC
CAGCGCGAAC TCGCCCGCTC GCTCGACGCG GTCGTCGAGG ATTGCGTGAA CGCGGTCGGC
GTTGACGCGA ATACCGCGTC GGTCGCGCTG CTGGCACGCG TATCGGGCCT GAATGCGACG
CTCGCGCGCA ACATCGTCGA CTATCGCGAC GCGAATGGGC CGTTCCCGTC GCGCGACCAT
CTGCGCAAGG TGCCGCGCCT CGGCGACAAG ACCTTCGAAC AGGCCGCCGG CTTCCTGCGC
ATCAACGGCG GCGAGAATCC GCTCGACCGG TCGTCGGTCC ACCCGGAGGC CTACCCGGTC
GTCGAACGGA TCCTCGCGAA GATCAACAAG CGCATCGATG ACGTGCTCGG CAGCCGCGAC
GCGCTGTCCG GACTGTCGCC GACGGAATTT GTTGACGAAC GTTTCGGCCT GCCGACCGTG
CGCGACATCC TGTCCGAACT CGAAAAACCG GGTCGCGACC CGCGGCCCGA ATTCAAGACC
GCCACGTTCC GCGACGGCGT CGAGAAGGTG TCCGATCTGA TGCCCGGCAT GCTCCTCGAA
GGGGTCGTGA CGAACGTCGC GGCGTTCGGC GCGTTCGTGG ATATCGGCGT GCACCAGGAC
GGCCTCGTCC ACGTGTCGGC GATGTCGACG AAGTTCATCA AGGATCCGCA CGAAGTCGTG
AAGGCCGGCC AGGTCGTCAA GGTCAAGGTG CTCGACGTCG ACGTGAAGCG TCAGCGCATT
GCGCTGACGA TGCGCCTCGA CGACGAAGCG GCCGCGCCCG GCATGGCGTC GCGCAGCAGT
CAGGAGCGCG GCAATGCCGG CCGCGGCGCG GCCCGCCCGC AGCGTTCGCG CGAGCCGGAA
CCGGCCGGTG CGATGGCCGC GGCGTTCGCG AAGCTGAAGC GCTGA
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| Protein sequence | MTETVALKIV QRIATELSVQ PRQVAAAVQL LDEGSTVPFI ARYRKEVTGN LDDTQLRQLE
ERLLYLRELE DRRATILSSI DEQGKLTDEL RAAIDAADSK QVLEDLYLPY KPKRRTRAQI
AREAGLEPLA QALLANPLLD PQAEAAAYVD ADKGVADVKA ALDGARDILS EQFGETAELL
GKLRDYLHSQ GVVSSAVVEG KENEEGEKFR DYYDYAETIR TVPSHRALAL FRGRNAGVLT
VKLGLGEELD AQVPHPGEAM IARHFGIANQ NRPADKWLSD VCRWCWRVKV QPHIENELLT
QLRETAEAEA IRVFARNLKD LLLAAPAGPK AVIGLDPGLR TGVKVAVVDR TGKLLATDTI
YPHEPRRDWD GSLAKLARIA AQTQAELISI GNGTASRETD KLASELISKH PELRLQKIVV
SEAGASVYSA SELAAKEFPE LDVSLRGAVS IARRLQDPLA ELVKIEPKAI GVGQYQHDVN
QRELARSLDA VVEDCVNAVG VDANTASVAL LARVSGLNAT LARNIVDYRD ANGPFPSRDH
LRKVPRLGDK TFEQAAGFLR INGGENPLDR SSVHPEAYPV VERILAKINK RIDDVLGSRD
ALSGLSPTEF VDERFGLPTV RDILSELEKP GRDPRPEFKT ATFRDGVEKV SDLMPGMLLE
GVVTNVAAFG AFVDIGVHQD GLVHVSAMST KFIKDPHEVV KAGQVVKVKV LDVDVKRQRI
ALTMRLDDEA AAPGMASRSS QERGNAGRGA ARPQRSREPE PAGAMAAAFA KLKR
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