| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1722 |
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| Symbol | rimO |
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| ID | 4310328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1903608 |
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| End bp | 1904969 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149536 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_773612 |
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| Protein GI | 115351773 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGT CCCCCAAAGT AGGCTTCGTA TCGCTCGGGT GCCCGAAAGC CCTCGTCGAC
TCCGAACAAA TCATCACGCA GCTGCGCGCC GAAGGTTATG AAATCTCCGG CACGTACGAC
GGCGCCGACC TCGTCGTCGT CAACACCTGC GGTTTCATCG ACGAAGCGGT GCAGGAAAGC
CTCGATGCGA TCGGCGAAGC ACTGACCGAG AACGGCAAGG TGATCGTCAC CGGCTGCCTC
GGCGCGAAGT CGAGCGCGAG CGGCTCGAAC CTCATCGAGG AAGTCCATCC GAAGGTGCTC
GCCGTCACCG GCCCGCACGC GGTGGGCGAA GTGATGCAGG CCGTGCATTC GCACCTGCCG
AAGCCGCACG ACCCGTTCGT CGATCTCGTG CCGGCCGCCG GCATCAAGCT CACGCCGCGC
CACTACGCAT ACCTGAAGAT CTCCGAAGGC TGCAACCACC GCTGCACGTT TTGCATCATC
CCGTCGATGC GCGGCGACCT CGTGTCGCGC CCGGTCGCCG AAGTGATGCT CGAGGCGGAG
AACCTGTTCA AGTCGGGCGT GAAGGAACTG CTCGTGATTT CGCAGGACAC GAGCGCGTAC
GGCGTCGACG TGAAGTACCG CACGGGCTTC TGGAACGGCA AGCCGATCAA GACTCGCATG
ACGGATCTGG TCGCCGCGCT CGGCGAACTC GCCGCGCAGT ACGGCGCATG GGTGCGCCTG
CACTACGTGT ATCCGTATCC GAGCGTCGAC GAAGTCATTC CGCTGATGGC CGACGGCCCG
TTCAAGGGCC ACGTGCTGCC GTATCTGGAC GTGCCGTTCC AGCACGCGCA TCCGGAAGTG
CTGAAGCGCA TGAAGCGCCC GGCCAACGCG GAGAAAGTGC TCGAGCGCGT GCAGAAGTGG
CGCGAGATCT GCCCGGACCT GACGATCCGC AGCACCTTCA TCGCCGGCTT CCCGGGCGAG
ACGGAAGAGC AGTTCGAAAC GCTGCTCGAC TTCATCCGCG AGGCGGAACT CGATCGCGTC
GGCTGCTTTG CGTATTCGCC GGTCGAAGGC GCGAGCGCGA ACGAACTGGA CGGCGCGCTG
CCGGACGACG TTCGCGAAGA GCGCCGCGCG CGCTTCATGG AAGTCGCCGA GGAAGTGTCG
GCGCAGCGCA TCCAGCGCAA GGTCGGCAAG ACCCTCAAGG TGCTGATCGA CGAAGTCAGC
GCGGAAGGCG GCATCGGCCG CACGGCGGCG GATGCGCCGG AGATCGACGG CGTCGTCTAT
GTCGAGCCGG CGACGAAGGC GTCGAAGCGC TACAAGGTCG GCGATTTCGT GTCGGTGAAG
ATCACGGGCG CGGACGGCCA CGACCTGTGG GGCGAGGTGT AA
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| Protein sequence | MSQSPKVGFV SLGCPKALVD SEQIITQLRA EGYEISGTYD GADLVVVNTC GFIDEAVQES
LDAIGEALTE NGKVIVTGCL GAKSSASGSN LIEEVHPKVL AVTGPHAVGE VMQAVHSHLP
KPHDPFVDLV PAAGIKLTPR HYAYLKISEG CNHRCTFCII PSMRGDLVSR PVAEVMLEAE
NLFKSGVKEL LVISQDTSAY GVDVKYRTGF WNGKPIKTRM TDLVAALGEL AAQYGAWVRL
HYVYPYPSVD EVIPLMADGP FKGHVLPYLD VPFQHAHPEV LKRMKRPANA EKVLERVQKW
REICPDLTIR STFIAGFPGE TEEQFETLLD FIREAELDRV GCFAYSPVEG ASANELDGAL
PDDVREERRA RFMEVAEEVS AQRIQRKVGK TLKVLIDEVS AEGGIGRTAA DAPEIDGVVY
VEPATKASKR YKVGDFVSVK ITGADGHDLW GEV
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